This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2yl9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:05, 1 February 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='2yl9' size='340' side='right'caption='[[2yl9]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
<StructureSection load='2yl9' size='340' side='right'caption='[[2yl9]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2yl9]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Strpn Strpn]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YL9 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2YL9 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2yl9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YL9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YL9 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.65&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2yl8|2yl8]], [[2yla|2yla]], [[2yl6|2yl6]], [[2yl5|2yl5]], [[2yll|2yll]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Beta-N-acetylhexosaminidase Beta-N-acetylhexosaminidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.52 3.2.1.52] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yl9 OCA], [https://pdbe.org/2yl9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yl9 RCSB], [https://www.ebi.ac.uk/pdbsum/2yl9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yl9 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2yl9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yl9 OCA], [http://pdbe.org/2yl9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yl9 RCSB], [http://www.ebi.ac.uk/pdbsum/2yl9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yl9 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/STRH_STRPN STRH_STRPN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 23:
*[[Beta-Hexosaminidase|Beta-Hexosaminidase]]
*[[Beta-Hexosaminidase|Beta-Hexosaminidase]]
*[[Beta-Hexosaminidase 3D structures|Beta-Hexosaminidase 3D structures]]
*[[Beta-Hexosaminidase 3D structures|Beta-Hexosaminidase 3D structures]]
 +
*[[Beta-N-acetylhexosaminidase 3D structures|Beta-N-acetylhexosaminidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Beta-N-acetylhexosaminidase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Strpn]]
+
[[Category: Streptococcus pneumoniae TIGR4]]
-
[[Category: Abbott, D W]]
+
[[Category: Abbott DW]]
-
[[Category: Boraston, A B]]
+
[[Category: Boraston AB]]
-
[[Category: Dalia, A B]]
+
[[Category: Dalia AB]]
-
[[Category: Deng, L]]
+
[[Category: Deng L]]
-
[[Category: Fairbanks, A J]]
+
[[Category: Fairbanks AJ]]
-
[[Category: Higgins, M A]]
+
[[Category: Higgins MA]]
-
[[Category: Parsons, T B]]
+
[[Category: Parsons TB]]
-
[[Category: Pluvinage, B]]
+
[[Category: Pluvinage B]]
-
[[Category: Robb, C]]
+
[[Category: Robb C]]
-
[[Category: Vocadlo, D J]]
+
[[Category: Vocadlo DJ]]
-
[[Category: Weiser, J N]]
+
[[Category: Weiser JN]]
-
[[Category: Hydrolase]]
+

Current revision

INHIBITION OF THE PNEUMOCOCCAL VIRULENCE FACTOR STRH AND MOLECULAR INSIGHTS INTO N-GLYCAN RECOGNITION AND HYDROLYSIS

PDB ID 2yl9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools