2yy6

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Current revision (05:38, 17 October 2024) (edit) (undo)
 
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<StructureSection load='2yy6' size='340' side='right'caption='[[2yy6]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='2yy6' size='340' side='right'caption='[[2yy6]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2yy6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aquae Aquae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YY6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2YY6 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2yy6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aquifex_aeolicus_VF5 Aquifex aeolicus VF5]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YY6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YY6 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoglycolate_phosphatase Phosphoglycolate phosphatase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.3.18 3.1.3.18] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yy6 OCA], [https://pdbe.org/2yy6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yy6 RCSB], [https://www.ebi.ac.uk/pdbsum/2yy6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yy6 ProSAT], [https://www.topsan.org/Proteins/RSGI/2yy6 TOPSAN]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2yy6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yy6 OCA], [http://pdbe.org/2yy6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2yy6 RCSB], [http://www.ebi.ac.uk/pdbsum/2yy6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2yy6 ProSAT], [http://www.topsan.org/Proteins/RSGI/2yy6 TOPSAN]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/GPH_AQUAE GPH_AQUAE]] Specifically catalyzes the dephosphorylation of 2-phosphoglycolate (By similarity).[HAMAP-Rule:MF_00495]
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[https://www.uniprot.org/uniprot/GPH_AQUAE GPH_AQUAE] Specifically catalyzes the dephosphorylation of 2-phosphoglycolate (By similarity).[HAMAP-Rule:MF_00495]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/2yy6_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yy/2yy6_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Aquae]]
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[[Category: Aquifex aeolicus VF5]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Phosphoglycolate phosphatase]]
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[[Category: Kumarevel TS]]
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[[Category: Kumarevel, T S]]
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[[Category: Kuramitsu S]]
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[[Category: Kuramitsu, S]]
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[[Category: Tanaka T]]
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[[Category: Structural genomic]]
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[[Category: Yokoyama S]]
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[[Category: Tanaka, T]]
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[[Category: Yokoyama, S]]
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[[Category: Hydrolase]]
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[[Category: National project on protein structural and functional analyse]]
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[[Category: Nppsfa]]
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[[Category: Rsgi]]
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Current revision

Crystal Structure of the phosphoglycolate phosphatase from Aquifex aeolicus VF5

PDB ID 2yy6

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