Ferredoxin 3D structures
From Proteopedia
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*2Fe-2S containing ferredoxins | *2Fe-2S containing ferredoxins | ||
| + | **[[8rmc]], [[8rmd]], [[8rmf]], [[8rmg]] – hFd iron-sulfur cluster assembly complex – human – Cryo EM <br /> | ||
| + | **[[6yac]], [[6yez]] – Fd in PSI-Fd complex – pea – Cryo EM<br /> | ||
**[[2kaj]], [[1dox]], [[1doy]] – SyFd +Ga – ''Synechocystis'' – NMR <br /> | **[[2kaj]], [[1dox]], [[1doy]] – SyFd +Ga – ''Synechocystis'' – NMR <br /> | ||
| - | **[[3hui]], [[4ltu]] – Fd – ''Rhodopseudomonas palustris'' <br /> | ||
**[[1off]] – SyFd <br /> | **[[1off]] – SyFd <br /> | ||
| + | **[[3hui]], [[4ltu]] – RpFd – ''Rhodopseudomonas palustris'' <br /> | ||
| + | **[[8zzd]] – RpFd + P450 | ||
**[[3gce]] – Fd – ''Nocardioides aromaticivorans'' <br /> | **[[3gce]] – Fd – ''Nocardioides aromaticivorans'' <br /> | ||
**[[3lxf]] – Fd – ''Novosphingobium aromaticivorans''<br /> | **[[3lxf]] – Fd – ''Novosphingobium aromaticivorans''<br /> | ||
**[[2e4p]], [[2e4q]] - Fd – ''Pseudomonas sp.'' <br /> | **[[2e4p]], [[2e4q]] - Fd – ''Pseudomonas sp.'' <br /> | ||
**[[2q3w]], [[1vm9]] - PmFd (mutant) – ''Pseudomonas mendocina'' <br /> | **[[2q3w]], [[1vm9]] - PmFd (mutant) – ''Pseudomonas mendocina'' <br /> | ||
| - | **[[2i7f]], [[1uwm]] - RcFd – ''Rhodobacter capsulatus'' <br /> | + | **[[2i7f]], [[1uwm]], [[9i2a]] - RcFd – ''Rhodobacter capsulatus'' <br /> |
**[[1e9m]] – RcFd - NMR<br /> | **[[1e9m]] – RcFd - NMR<br /> | ||
**[[1rfk]], [[3p63]] - Fd – ''Cyanobacterium'' ''masticogladus laminosus'' <br /> | **[[1rfk]], [[3p63]] - Fd – ''Cyanobacterium'' ''masticogladus laminosus'' <br /> | ||
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**[[1e10]] - Fd – ''Halobacterium halobium''<br /> | **[[1e10]] - Fd – ''Halobacterium halobium''<br /> | ||
**[[1pfd]] – Fd – ''Petroselinum crispum'' – NMR <br /> | **[[1pfd]] – Fd – ''Petroselinum crispum'' – NMR <br /> | ||
| - | **[[1a70]] - | + | **[[9gyd]], [[9gyn]], [[9gyr]], [[9gyl]], [[9gyu]] - SpFd – Spinach |
| + | **[[1a70]] - SpFd (mutant) <br /> | ||
| + | **[[9hi3]] - SpFd 51-147 + FusB | ||
**[[1awd]] - Fd – ''Chlorella fusca'' <br /> | **[[1awd]] - Fd – ''Chlorella fusca'' <br /> | ||
**[[2cjn]], [[2cjo]], [[1roe]] – SyFd – NMR <br /> | **[[2cjn]], [[2cjo]], [[1roe]] – SyFd – NMR <br /> | ||
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**[[5h92]], [[5h8y]] – mFd + sulfite reductase<br /> | **[[5h92]], [[5h8y]] – mFd + sulfite reductase<br /> | ||
**[[3b2g]] – Fd – ''Leptolyngbya boryana''<br /> | **[[3b2g]] – Fd – ''Leptolyngbya boryana''<br /> | ||
| - | **[[2mh7]] – Fd – ''Chlamydomonas reinhardtii''<br /> | ||
**[[1ewy]] – Fd + ferredoxin-NADP reductase - ''Nostoc''<br /> | **[[1ewy]] – Fd + ferredoxin-NADP reductase - ''Nostoc''<br /> | ||
**[[5ffi]], [[5abr]] - AvFd – ''Azotobacter vinelandii''<br /> | **[[5ffi]], [[5abr]] - AvFd – ''Azotobacter vinelandii''<br /> | ||
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**[[6b03]], [[6b05]], [[6brs]] – AtFd-2 + zinc protease<br /> | **[[6b03]], [[6b05]], [[6brs]] – AtFd-2 + zinc protease<br /> | ||
**[[6e6s]], [[6e6r]], [[6e6q]] – PaFd (mutant)_- ''Pseudomonas aeruginosa''<br /> | **[[6e6s]], [[6e6r]], [[6e6q]] – PaFd (mutant)_- ''Pseudomonas aeruginosa''<br /> | ||
| - | **[[6kum]], [[6kv0]], [[6lk1]] – | + | **[[2mh7]], [[6kum]], [[6kv0]], [[6lk1]] – CrFd – ''Chlamydomonas reinhardtii''<br /> |
| + | **[[7wzn]] – CrFd in photosystem I – Cryo EM<br /><br /> | ||
| + | **[[7ylr]] – Fd + FMN – ''Variovorax paradoxus''<br /> | ||
| + | **[[8rho]] - AvFd – ''Azotobacter vinelandii'' | ||
**[[6vjv]] – Fd – ''Prochlorococcus'' phage<br /> | **[[6vjv]] – Fd – ''Prochlorococcus'' phage<br /> | ||
*4Fe-4S containing ferredoxins | *4Fe-4S containing ferredoxins | ||
| - | **[[3eun]] – | + | **[[3eun]] – AlvFd – ''Allochromatium vinosum'' <br /> |
| - | **[[3exy]] - | + | **[[3exy]] - AlvFd (mutant) <br /> |
**[[2vkr]] - Fd+Zn – ''Acidianus ambivalens'' <br /> | **[[2vkr]] - Fd+Zn – ''Acidianus ambivalens'' <br /> | ||
**[[2z8q]] - PfFd (mutant) – ''Pyrococcus furiosus'' <br /> | **[[2z8q]] - PfFd (mutant) – ''Pyrococcus furiosus'' <br /> | ||
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**[[2fgo]] - PaFd <br /> | **[[2fgo]] - PaFd <br /> | ||
**[[1iqz]], [[1ir0]] - BtFd – ''Bacillus thermoproteolyticus'' <br /> | **[[1iqz]], [[1ir0]] - BtFd – ''Bacillus thermoproteolyticus'' <br /> | ||
| + | **[[7yl8]] – BtFd - neutron | ||
**[[1rgv]] - Fd – ''Thauera aromatica'' <br /> | **[[1rgv]] - Fd – ''Thauera aromatica'' <br /> | ||
**[[1dax]], [[1dfd]] – DaFd – ''Desulfovibrio africanus'' – NMR <br /> | **[[1dax]], [[1dfd]] – DaFd – ''Desulfovibrio africanus'' – NMR <br /> | ||
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**[[1vjw]] – Fd – ''Thermotoga maritima'' <br /> | **[[1vjw]] – Fd – ''Thermotoga maritima'' <br /> | ||
**[[1dwl]] – Fd – ''Desulfomicrobium norvegicum''<br /> | **[[1dwl]] – Fd – ''Desulfomicrobium norvegicum''<br /> | ||
| + | **[[7m1n]] – Fd – ''Hydrogenobacter thermophilus''<br /> | ||
*3Fe-4S containing ferredoxins | *3Fe-4S containing ferredoxins | ||
**[[2v2k]] – Fd – ''Mycobacterium smegmatis'' <br /> | **[[2v2k]] – Fd – ''Mycobacterium smegmatis'' <br /> | ||
| + | **[[8amp]] - Fd – ''Mycobacterium tuberculosis'' | ||
**[[1wtf]] - BtFd (mutant) <br /> | **[[1wtf]] - BtFd (mutant) <br /> | ||
**[[1sj1]] - PfFd <br /> | **[[1sj1]] - PfFd <br /> | ||
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**[[1f2g]] – DgFd – NMR <br /> | **[[1f2g]] – DgFd – NMR <br /> | ||
**[[1xer]] - Fd – ''Sulfolobus tokodaii'' <br /> | **[[1xer]] - Fd – ''Sulfolobus tokodaii'' <br /> | ||
| + | |||
| + | *4Fe-4S+2Fe-2S containing ferredoxins | ||
| + | |||
| + | **[[6khi]] , [[6l7o]]– SyFd in photosynthetic NADPH dehydrogenase complex – Cryo EM<br /> | ||
*4Fe-4S+3Fe-4S containing ferredoxins | *4Fe-4S+3Fe-4S containing ferredoxins | ||
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**[[1clf]] – Fd – ''Clostridium pasteurianum'' – NMR <br /> | **[[1clf]] – Fd – ''Clostridium pasteurianum'' – NMR <br /> | ||
| - | * | + | *4Fe-4S+4Fe-Ni-4S containing ferredoxins |
| + | |||
| + | **[[9g03]] – Fd + CO dehydrogenase/AcCo synthase – ''Clostridium autoethanogenum'' – Cryo EM | ||
| + | |||
| + | *Adrenodoxin | ||
**[[3p1m]] - hADR - human<br /> | **[[3p1m]] - hADR - human<br /> | ||
| + | **[[7m8i]] – hADR/Cyp11B2 + fadrozole<br /> | ||
**[[3na0]], [[3n9y]], [[3n9z]], [[3na1]] - hADR +cholesterol side-chain cleavage enzyme<br /> | **[[3na0]], [[3n9y]], [[3n9z]], [[3na1]] - hADR +cholesterol side-chain cleavage enzyme<br /> | ||
**[[1cje]], [[1ayf]] - bADR - bovine <br /> | **[[1cje]], [[1ayf]] - bADR - bovine <br /> | ||
Current revision
3D structures of ferredoxin
Updated on 11-June-2025
