2z45
From Proteopedia
(Difference between revisions)
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<StructureSection load='2z45' size='340' side='right'caption='[[2z45]], [[Resolution|resolution]] 2.15Å' scene=''> | <StructureSection load='2z45' size='340' side='right'caption='[[2z45]], [[Resolution|resolution]] 2.15Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2z45]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2z45]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_sp._PCC_7002 Synechococcus sp. PCC 7002]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z45 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2Z45 FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.15Å</td></tr> |
- | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2z45 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2z45 OCA], [https://pdbe.org/2z45 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2z45 RCSB], [https://www.ebi.ac.uk/pdbsum/2z45 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2z45 ProSAT]</span></td></tr> |
</table> | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/RBCX_SYNP2 RBCX_SYNP2] An RbcL-specific chaperone. Required for assembly of the RbcL8 core, acting downstream of the major chaperonin (GroEL-GroES). Acts on newly folded RbcL, has a transient dynamic interaction with RbcL and is eventually displaced by RbcS (PubMed:17574029). The central cleft of the RbcX homodimer (RbcX2) binds the C-terminus of an RbcL monomer, stabilizing the C-terminus and probably preventing its reassociation with chaperonin GroEL-ES. At the same time the peripheral region of RbcX2 binds a second RbcL monomer, bridging the RbcL homodimers in the correct orientation. The RbcX2(2)-bound RbcL dimers then assemble into the RbcL8 core (RbcL8-(RbcX2)8). RbcS binding triggers the release of RbcX2 (By similarity). Required for optimal reconstitution of RuBisCO into its RbcL8S8 holoenzyme form upon expression of rbcL-rbcS subunits in E.coli, and probably also in situ. A frameshift mutation that replaces half the protein reduces accumulation of both RbcL and RbcS subunits and halves activity of RuBisCO in situ and in E.coli (PubMed:15564522).[UniProtKB:Q44212]<ref>PMID:15564522</ref> <ref>PMID:17574029</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z45 ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2z45 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Synechococcus sp]] | + | [[Category: Synechococcus sp. PCC 7002]] |
- | [[Category: Ashida | + | [[Category: Ashida H]] |
- | [[Category: Ihara | + | [[Category: Ihara K]] |
- | [[Category: Kanai | + | [[Category: Kanai S]] |
- | [[Category: Kato | + | [[Category: Kato R]] |
- | [[Category: Miyasaka | + | [[Category: Miyasaka H]] |
- | [[Category: Onizuka | + | [[Category: Onizuka T]] |
- | [[Category: Tanaka | + | [[Category: Tanaka S]] |
- | [[Category: Tomimoto | + | [[Category: Tomimoto Y]] |
- | [[Category: Wakatsuki | + | [[Category: Wakatsuki S]] |
- | [[Category: Yamada | + | [[Category: Yamada Y]] |
- | [[Category: Yokota | + | [[Category: Yokota A]] |
- | + | ||
- | + |
Current revision
Crystal Structure of Zn-bound ORF134
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Categories: Large Structures | Synechococcus sp. PCC 7002 | Ashida H | Ihara K | Kanai S | Kato R | Miyasaka H | Onizuka T | Tanaka S | Tomimoto Y | Wakatsuki S | Yamada Y | Yokota A