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6v06

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Current revision (08:01, 11 October 2023) (edit) (undo)
 
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<StructureSection load='6v06' size='340' side='right'caption='[[6v06]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='6v06' size='340' side='right'caption='[[6v06]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6v06]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V06 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6V06 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6v06]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6V06 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6V06 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1c1z|1c1z]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6v06 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v06 OCA], [http://pdbe.org/6v06 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6v06 RCSB], [http://www.ebi.ac.uk/pdbsum/6v06 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6v06 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6v06 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6v06 OCA], [https://pdbe.org/6v06 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6v06 RCSB], [https://www.ebi.ac.uk/pdbsum/6v06 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6v06 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/APOH_HUMAN APOH_HUMAN]] Binds to various kinds of negatively charged substances such as heparin, phospholipids, and dextran sulfate. May prevent activation of the intrinsic blood coagulation cascade by binding to phospholipids on the surface of damaged cells.
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[https://www.uniprot.org/uniprot/APOH_HUMAN APOH_HUMAN] Binds to various kinds of negatively charged substances such as heparin, phospholipids, and dextran sulfate. May prevent activation of the intrinsic blood coagulation cascade by binding to phospholipids on the surface of damaged cells.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Chen, Z]]
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[[Category: Chen Z]]
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[[Category: Chinnaraj, M]]
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[[Category: Chinnaraj M]]
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[[Category: Macor, P]]
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[[Category: Macor P]]
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[[Category: Pengo, V]]
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[[Category: Pengo V]]
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[[Category: Planer, W]]
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[[Category: Planer W]]
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[[Category: Pozzi, N]]
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[[Category: Pozzi N]]
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[[Category: Ruben, E A]]
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[[Category: Ruben EA]]
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[[Category: Tedesco, F]]
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[[Category: Tedesco F]]
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[[Category: Zuo, X]]
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[[Category: Zuo X]]
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[[Category: Autoimmunity]]
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[[Category: Blood clotting]]
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[[Category: Coagulation]]
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[[Category: Innate immune system]]
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[[Category: Plasma glycoprotein]]
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[[Category: Sushi domain]]
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[[Category: Thrombosis]]
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Current revision

Crystal structure of Beta-2 glycoprotein I purified from plasma (pB2GPI)

PDB ID 6v06

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