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5lkg

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Current revision (18:31, 18 October 2023) (edit) (undo)
 
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<StructureSection load='5lkg' size='340' side='right'caption='[[5lkg]], [[Resolution|resolution]] 1.51&Aring;' scene=''>
<StructureSection load='5lkg' size='340' side='right'caption='[[5lkg]], [[Resolution|resolution]] 1.51&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5lkg]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Norovirus_hu/gii/jp/2015/gii.p17_gii.17/kawasaki308 Norovirus hu/gii/jp/2015/gii.p17_gii.17/kawasaki308]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LKG OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5LKG FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5lkg]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Norovirus_Hu/GII/JP/2015/GII.P17_GII.17/Kawasaki308 Norovirus Hu/GII/JP/2015/GII.P17_GII.17/Kawasaki308]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LKG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LKG FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.51&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5fmo|5fmo]], [[5hzb|5hzb]], [[5j35|5j35]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1634342 Norovirus Hu/GII/JP/2015/GII.P17_GII.17/Kawasaki308])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lkg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lkg OCA], [https://pdbe.org/5lkg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lkg RCSB], [https://www.ebi.ac.uk/pdbsum/5lkg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lkg ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5lkg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lkg OCA], [http://pdbe.org/5lkg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5lkg RCSB], [http://www.ebi.ac.uk/pdbsum/5lkg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5lkg ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A0E4B1P1_9CALI A0A0E4B1P1_9CALI]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 5lkg" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5lkg" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Norovirus hu/gii/jp/2015/gii p17_gii 17/kawasaki308]]
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[[Category: Norovirus Hu/GII/JP/2015/GII P17_GII 17/Kawasaki308]]
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[[Category: Hansman, G S]]
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[[Category: Hansman GS]]
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[[Category: Morozov, V]]
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[[Category: Morozov V]]
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[[Category: Singh, B K]]
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[[Category: Singh BK]]
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[[Category: Hmo]]
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[[Category: Norovirus]]
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[[Category: P domain]]
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[[Category: Protruding domain]]
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[[Category: Viral protein]]
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[[Category: Virus capsid]]
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Current revision

Protruding domain of GII.17 norovirus Kawasaki308 in complex with 2-fucosyllactose (2'FL)

PDB ID 5lkg

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OCA

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