6vgz
From Proteopedia
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<StructureSection load='6vgz' size='340' side='right'caption='[[6vgz]], [[Resolution|resolution]] 2.25Å' scene=''> | <StructureSection load='6vgz' size='340' side='right'caption='[[6vgz]], [[Resolution|resolution]] 2.25Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6VGZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6VGZ FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=QZG:N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-({[trans-4-(propan-2-yl)cyclohexyl]oxy}carbonyl)-L-leucinamide'>QZG</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=QZG:N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-N~2~-({[trans-4-(propan-2-yl)cyclohexyl]oxy}carbonyl)-L-leucinamide'>QZG</scene></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6vgz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6vgz OCA], [https://pdbe.org/6vgz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6vgz RCSB], [https://www.ebi.ac.uk/pdbsum/6vgz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6vgz ProSAT]</span></td></tr> |
</table> | </table> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | Pathogenic coronaviruses are a major threat to global public health, as exemplified by Severe Acute Respiratory Syndrome coronavirus (SARS-CoV), Middle East respiratory syndrome coronavirus (MERS-CoV) and the newly emerged SARS-CoV-2, the causative agent of coronavirus disease 2019 (COVID-19). We describe herein the structure-guided optimization of a series of inhibitors of the coronavirus 3C-like protease (3CLpro), an enzyme essential for viral replication. The optimized compounds were effective against several human coronaviruses including MERS-CoV, SARS-CoV and SARS-CoV-2 in an enzyme assay and in cell-based assays using Huh-7 and Vero E6 cell lines. Two selected compounds showed antiviral effects against SARS-CoV-2 in cultured primary human airway epithelial cells. In a mouse model of MERS-CoV infection, administration of a lead compound one day after virus infection increased survival from 0 to 100% and reduced lung viral titers and lung histopathology. These results suggest that this series of compounds has the potential to be developed further as antiviral drugs against human coronaviruses. | ||
- | + | ==See Also== | |
- | + | *[[Virus protease 3D structures|Virus protease 3D structures]] | |
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | + | [[Category: Battaile KP]] | |
- | [[Category: Battaile | + | [[Category: Chang KO]] |
- | [[Category: Chang | + | [[Category: Groutas WC]] |
- | [[Category: Groutas | + | [[Category: Kashipathy MM]] |
- | [[Category: Kashipathy | + | [[Category: Kim Y]] |
- | [[Category: Kim | + | [[Category: Lovell S]] |
- | [[Category: Lovell | + | [[Category: Nguyen HN]] |
- | [[Category: Nguyen | + | [[Category: Rathnayake AD]] |
- | [[Category: Rathnayake | + | [[Category: Zheng J]] |
- | [[Category: Zheng | + | |
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Current revision
2.25 A resolution structure of MERS 3CL protease in complex with inhibitor 6d
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Categories: Large Structures | Battaile KP | Chang KO | Groutas WC | Kashipathy MM | Kim Y | Lovell S | Nguyen HN | Rathnayake AD | Zheng J