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5ml2
From Proteopedia
(Difference between revisions)
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<StructureSection load='5ml2' size='340' side='right'caption='[[5ml2]], [[Resolution|resolution]] 1.60Å' scene=''> | <StructureSection load='5ml2' size='340' side='right'caption='[[5ml2]], [[Resolution|resolution]] 1.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[5ml2]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[5ml2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ML2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ML2 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH6:~{N}1-[(4-CHLOROPHENYL)METHYL]-~{N}1-CYCLOPENTYL-~{N}4-(PHENYLMETHYL)BENZENE-1,4-DISULFONAMIDE'>NH6</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH6:~{N}1-[(4-CHLOROPHENYL)METHYL]-~{N}1-CYCLOPENTYL-~{N}4-(PHENYLMETHYL)BENZENE-1,4-DISULFONAMIDE'>NH6</scene></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ml2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ml2 OCA], [https://pdbe.org/5ml2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ml2 RCSB], [https://www.ebi.ac.uk/pdbsum/5ml2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ml2 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/PDE6D_HUMAN PDE6D_HUMAN] Acts as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude and does so by decreasing the nucleotide dissociation rate. Stabilizes Arl3-GTP by decreasing the nucleotide dissociation (By similarity). |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Homo sapiens]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Fansa | + | [[Category: Fansa EK]] |
| - | [[Category: Martin-Gago | + | [[Category: Martin-Gago P]] |
| - | [[Category: Waldmann | + | [[Category: Waldmann H]] |
| - | [[Category: Wittinghofer | + | [[Category: Wittinghofer A]] |
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Current revision
The crystal structure of PDE6D in complex with inhibitor-3
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