5mqt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (17:45, 8 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5mqt' size='340' side='right'caption='[[5mqt]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
<StructureSection load='5mqt' size='340' side='right'caption='[[5mqt]], [[Resolution|resolution]] 3.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5mqt]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MQT OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5MQT FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5mqt]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5MQT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5MQT FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DCM:2-DEOXYCYTIDINE-5-MONOPHOSPHATE'>DCM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=STI:4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE'>STI</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5mqj|5mqj]], [[5mql|5mql]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DCM:2-DEOXYCYTIDINE-5-MONOPHOSPHATE'>DCM</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=STI:4-(4-METHYL-PIPERAZIN-1-YLMETHYL)-N-[4-METHYL-3-(4-PYRIDIN-3-YL-PYRIMIDIN-2-YLAMINO)-PHENYL]-BENZAMIDE'>STI</scene>, <scene name='pdbligand=UDP:URIDINE-5-DIPHOSPHATE'>UDP</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Deoxycytidine_kinase Deoxycytidine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.74 2.7.1.74] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5mqt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mqt OCA], [https://pdbe.org/5mqt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5mqt RCSB], [https://www.ebi.ac.uk/pdbsum/5mqt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5mqt ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5mqt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5mqt OCA], [http://pdbe.org/5mqt PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5mqt RCSB], [http://www.ebi.ac.uk/pdbsum/5mqt PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5mqt ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/DCK_HUMAN DCK_HUMAN]] Required for the phosphorylation of the deoxyribonucleosides deoxycytidine (dC), deoxyguanosine (dG) and deoxyadenosine (dA). Has broad substrate specificity, and does not display selectivity based on the chirality of the substrate. It is also an essential enzyme for the phosphorylation of numerous nucleoside analogs widely employed as antiviral and chemotherapeutic agents.<ref>PMID:18377927</ref> <ref>PMID:20614893</ref>
+
[https://www.uniprot.org/uniprot/DCK_HUMAN DCK_HUMAN] Required for the phosphorylation of the deoxyribonucleosides deoxycytidine (dC), deoxyguanosine (dG) and deoxyadenosine (dA). Has broad substrate specificity, and does not display selectivity based on the chirality of the substrate. It is also an essential enzyme for the phosphorylation of numerous nucleoside analogs widely employed as antiviral and chemotherapeutic agents.<ref>PMID:18377927</ref> <ref>PMID:20614893</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 27: Line 26:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Deoxycytidine kinase]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Audebert, S]]
+
[[Category: Audebert S]]
-
[[Category: Baudelet, E]]
+
[[Category: Baudelet E]]
-
[[Category: Betzi, S]]
+
[[Category: Betzi S]]
-
[[Category: Combes, S]]
+
[[Category: Combes S]]
-
[[Category: Dubreuil, P]]
+
[[Category: Dubreuil P]]
-
[[Category: Gros, L]]
+
[[Category: Gros L]]
-
[[Category: Hajem, B]]
+
[[Category: Hajem B]]
-
[[Category: Hammam, K]]
+
[[Category: Hammam K]]
-
[[Category: Humbert, M]]
+
[[Category: Humbert M]]
-
[[Category: Letard, S]]
+
[[Category: Letard S]]
-
[[Category: Lopez, S]]
+
[[Category: Lopez S]]
-
[[Category: Lugari, A]]
+
[[Category: Lugari A]]
-
[[Category: Mansfield, C]]
+
[[Category: Mansfield C]]
-
[[Category: Morelli, X]]
+
[[Category: Morelli X]]
-
[[Category: Moussy, A]]
+
[[Category: Moussy A]]
-
[[Category: Pez, D]]
+
[[Category: Pez D]]
-
[[Category: Rebuffet, E]]
+
[[Category: Rebuffet E]]
-
[[Category: Saez-Ayala, M]]
+
[[Category: Saez-Ayala M]]
-
[[Category: Sepulveda, P de]]
+
[[Category: De Sepulveda P]]
-
[[Category: Dck]]
+
-
[[Category: Masitinib]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of dCK mutant C3S in complex with imatinib and UDP

PDB ID 5mqt

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools