This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5obc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:39, 6 December 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5obc' size='340' side='right'caption='[[5obc]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
<StructureSection load='5obc' size='340' side='right'caption='[[5obc]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5obc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OBC OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5OBC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5obc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OBC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OBC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=9Q8:tris(oxidaniumylidynemethyl)-tris(oxidanyl)ruthenium'>9Q8</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RU2:pentakis(oxidaniumyl)-(oxidaniumylidynemethyl)ruthenium'>RU2</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.07&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pancreatic_ribonuclease Pancreatic ribonuclease], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.27.5 3.1.27.5] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=9Q8:tris(oxidaniumylidynemethyl)-tris(oxidanyl)ruthenium'>9Q8</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=RU2:pentakis(oxidaniumyl)-(oxidaniumylidynemethyl)ruthenium'>RU2</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5obc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5obc OCA], [http://pdbe.org/5obc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5obc RCSB], [http://www.ebi.ac.uk/pdbsum/5obc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5obc ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5obc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5obc OCA], [https://pdbe.org/5obc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5obc RCSB], [https://www.ebi.ac.uk/pdbsum/5obc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5obc ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RNAS1_BOVIN RNAS1_BOVIN]] Endonuclease that catalyzes the cleavage of RNA on the 3' side of pyrimidine nucleotides. Acts on single stranded and double stranded RNA.<ref>PMID:7479688</ref>
+
[https://www.uniprot.org/uniprot/RNAS1_BOVIN RNAS1_BOVIN] Endonuclease that catalyzes the cleavage of RNA on the 3' side of pyrimidine nucleotides. Acts on single stranded and double stranded RNA.<ref>PMID:7479688</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 28: Line 28:
[[Category: Bos taurus]]
[[Category: Bos taurus]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Pancreatic ribonuclease]]
+
[[Category: Ferraro G]]
-
[[Category: Ferraro, G]]
+
[[Category: Merlino A]]
-
[[Category: Merlino, A]]
+
[[Category: Pontillo N]]
-
[[Category: Pontillo, N]]
+
-
[[Category: Co releasing molecule]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Protein-metallodrug interaction]]
+

Current revision

X-ray structure of the adduct formed upon reaction of ribonuclease A with the compound fac-[RuII(CO)3Cl2(N3-IM), IM=imidazole

PDB ID 5obc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/5obc"
Personal tools