Malate Dehydrogenase 3D structures
From Proteopedia
(Difference between revisions)
| (2 intermediate revisions not shown.) | |||
| Line 9: | Line 9: | ||
**[[2dfd]], [[4wlv]] – hMDH2 +NAD – human<br /> | **[[2dfd]], [[4wlv]] – hMDH2 +NAD – human<br /> | ||
| + | **[[7bsj]], [[7bsk]], [[7bsl]] – hMd2 (mutant) +NAD<br /> | ||
**[[4mdh]] – pMDH+NAD - pig<br /> | **[[4mdh]] – pMDH+NAD - pig<br /> | ||
| - | **[[2x0r]] – HmMDH (mutant)+NAD - ''Haloarcula marismortui'' | + | **[[1o6z]], [[2x0r]] – HmMDH (mutant)+NAD - ''Haloarcula marismortui''<br /> |
| - | + | ||
**[[1hlp]] – HmMDH+NAD<br /> | **[[1hlp]] – HmMDH+NAD<br /> | ||
**[[1x0i]] – AfMDH+NADH – ''Archaeoglobus fulgidus''<br /> | **[[1x0i]] – AfMDH+NADH – ''Archaeoglobus fulgidus''<br /> | ||
| Line 39: | Line 39: | ||
**[[6ihd]] – MsMd + NAD – ''Metallosphaera sedula''<br /> | **[[6ihd]] – MsMd + NAD – ''Metallosphaera sedula''<br /> | ||
**[[6itl]] – Md + NAD – ''Mannheimia succiniciproducens''<br /> | **[[6itl]] – Md + NAD – ''Mannheimia succiniciproducens''<br /> | ||
| + | **[[6y91]] – PfMd + NAD – ''Plasmodium falciparum''<br /> | ||
| + | **[[6zn7]] – BbMd + NADP – ''Bdellovibrio bacteriovorus''<br /> | ||
| + | **[[7f8d]], [[7x1l]] – GsMd (mutant) + NADH – ''Geobacillus stearophilus''<br /> | ||
* Md binary complex | * Md binary complex | ||
| + | **[[7rm9]] – hMd1 + malonate <br /> | ||
**[[4wle]] – hMd2 + citrate <br /> | **[[4wle]] – hMd2 + citrate <br /> | ||
**[[4wlf]] – hMd2 + malate <br /> | **[[4wlf]] – hMd2 + malate <br /> | ||
| Line 52: | Line 56: | ||
**[[6bal]] – HiMd + malate - ''Haemophilus influenzae''<br /> | **[[6bal]] – HiMd + malate - ''Haemophilus influenzae''<br /> | ||
**[[6qss]] – Md + Tb derivative – ''Ignicoccus islandicus''<br /> | **[[6qss]] – Md + Tb derivative – ''Ignicoccus islandicus''<br /> | ||
| + | **[[6zng]], [[6znt]] – BbMd + acetyl-CoA<br /> | ||
| + | **[[6znu]] – BbMd (mutant) + acetyl-CoA<br /> | ||
* Md ternary complex | * Md ternary complex | ||
| Line 67: | Line 73: | ||
**[[6ihe]] – MsMd + NAD + malate <br /> | **[[6ihe]] – MsMd + NAD + malate <br /> | ||
**[[6itk]] – Md + NAD + malate – ''Corynebacterium glutamicum''<br /> | **[[6itk]] – Md + NAD + malate – ''Corynebacterium glutamicum''<br /> | ||
| - | **[[6r8g]] – PfMd + NAD + thiazol derivative – '' | + | **[[6r8g]] – PfMd + NAD + thiazol derivative<br /> |
| + | **[[7by9]] – GsMd + NADH + oxalacetate – ''Geobacillus stearophilus''<br /> | ||
| + | **[[7bya]] – GsMd + adenosine diphosphoribose + oxalacetate <br /> | ||
* apo-MDH | * apo-MDH | ||
| + | **[[7rrl]] – hMd1<br /> | ||
**[[4wln]] – hMd2 <br /> | **[[4wln]] – hMd2 <br /> | ||
**[[1mld]] – pMDH<br /> | **[[1mld]] – pMDH<br /> | ||
| Line 76: | Line 85: | ||
**[[5zi3]] – yMd <br /> | **[[5zi3]] – yMd <br /> | ||
**[[2j5r]], [[2j5k]], [[2j5q]], [[1d3a]], [[4jco]] – HmMDH <br /> | **[[2j5r]], [[2j5k]], [[2j5q]], [[1d3a]], [[4jco]] – HmMDH <br /> | ||
| - | **[[2hlp]] – HmMDH (mutant)<br /> | + | **[[2hlp]], [[7q3x]] – HmMDH (mutant)<br /> |
| - | **[[3hhp]], [[2pwz]], [[6ka1]] – EcMDH <br /> | + | **[[3hhp]], [[2pwz]], [[6ka1]], [[7cgc]], [[7cgd]] – EcMDH <br /> |
| + | **[[7xqn]] – EcMd (mutant) br /> | ||
**[[3fi9]] – MDH – ''Porphyromonas gingivalis'' <br /> | **[[3fi9]] – MDH – ''Porphyromonas gingivalis'' <br /> | ||
**[[3d5t]] - MDH – ''Burkholderia pseudomallei''<br /> | **[[3d5t]] - MDH – ''Burkholderia pseudomallei''<br /> | ||
| Line 93: | Line 103: | ||
**[[4bgu]] – Md – ''Haloferax volcanii''<br /> | **[[4bgu]] – Md – ''Haloferax volcanii''<br /> | ||
**[[4bgv]] – Md – ''Picrophilus torridus''<br /> | **[[4bgv]] – Md – ''Picrophilus torridus''<br /> | ||
| - | ** | + | **[[5ulv]] – MeMd <br /> |
**[[4tvo]] – Md – ''Mycobacterium tuberculosis'' <br /> | **[[4tvo]] – Md – ''Mycobacterium tuberculosis'' <br /> | ||
**[[6aoo]] – HiMd <br /> | **[[6aoo]] – HiMd <br /> | ||
| Line 100: | Line 110: | ||
**[[6um4]] – Md – ''Naegleria fowleri''<br /> | **[[6um4]] – Md – ''Naegleria fowleri''<br /> | ||
**[[6pbl]] – Md – ''Legionella pneumophila''<br /> | **[[6pbl]] – Md – ''Legionella pneumophila''<br /> | ||
| + | **[[7by8]] – GsMd <br /> | ||
| + | **[[6zn4]], [[6zn9]], [[6znj]] – BbMd <br /> | ||
| + | **[[6zne]], [[6znk]], [[6znr]] – BbMd (mutant)<br /> | ||
| + | **[[7aob]] – Md – ''Thermaerobacter marianensis''<br /> | ||
| + | **[[7nrz]] – Md – ''Trypanosoma cruzi''<br /> | ||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Current revision
3D Structures of Malate Dehydrogenase
Updated on 25-June-2023
The holo-MDH contains NAD or its derivatives while the apo-MDH lacks it.
