Proteopedia:Macros

(Difference between revisions)

Current revision

peekaboo(ligand) hides ligand for 0.5 seconds by Karsten Theis
- param ligand: what to hide/show
- import: script /mc/ktheis.spt;
- example: peekaboo({998}); peekaboo('ACH');

putty(selection,scheme) colors protein trace according to B-factor and applies trace thickness proportional to B-factor value
- param selection what portion to color
- optional param scheme, if it is "wr" colors using gradient from white (low B) to red (high B); if absent or any other value, colors using the standard blue-white-red gradient (low to high B)
- import script /mc/aherraez.spt
- example putty( {protein} ); putty( {*:A}, "wr" ); putty( {*:B} );

For more about Macros and how to use them, see Proteopedia:DIY:Macros.

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-test
+*<b>blink(ligand)</b>
+** <u>import:</u> script /mc/ktheis.spt;
+*<b>bobble()</b>
+** <u>import:</u> script /mc/ktheis.spt;
+*<b>peekaboo(ligand)</b> <i>hides ligand for 0.5 seconds</i>  by [[User:Karsten Theis|Karsten Theis]]
+** param <u>ligand:</u> what to hide/show
+** <u>import:</u> script /mc/ktheis.spt;
+** <u>example:</u> peekaboo({998}); peekaboo('ACH');
+*<b>putty(selection,scheme)</b> <i>colors protein trace according to B-factor and applies trace thickness proportional to B-factor value</i>
+** param <u>selection</u> what portion to color
+** optional param <u>scheme</u>, if it is "wr" colors using gradient from white (low B) to red (high B); if absent or any other value, colors using the standard blue-white-red gradient (low to high B)
+** <u>import</u> script /mc/aherraez.spt
+** <u>example</u> putty( {protein} ); putty( {*:A}, "wr" ); putty( {*:B} );
+*<b>wobble()</b>
+** <u>import:</u> script /mc/ktheis.spt;
+For more about Macros and how to use them, see [[Proteopedia:DIY:Macros]].