7cxt
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 7cxt is ON HOLD Authors: Kim, J.H., Kim, J.S. Description: Crystal structure of a GDP-6-OMe-4-keto-L-xylo-heptose reductase from C.jejuni [[Categor...) |
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of a GDP-6-OMe-4-keto-L-xylo-heptose reductase from C.jejuni== | |
+ | <StructureSection load='7cxt' size='340' side='right'caption='[[7cxt]], [[Resolution|resolution]] 2.05Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[7cxt]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni_subsp._jejuni_NCTC_11168_=_ATCC_700819 Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7CXT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7CXT FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7cxt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7cxt OCA], [https://pdbe.org/7cxt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7cxt RCSB], [https://www.ebi.ac.uk/pdbsum/7cxt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7cxt ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q0P8I6_CAMJE Q0P8I6_CAMJE] Catalyzes the two-step NADP-dependent conversion of GDP-4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.[HAMAP-Rule:MF_00956] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Carbohydrates play a major role in infection strategies of various enteric pathogens. In Campylobacter jejuni, the most common cause of gastroenteritis, uniquely modified heptoses found in surface carbohydrates are synthesized by specific pathways. Owing to the importance of such pathways for the infectious potential of pathogens and/or their virulence, these biosynthesis pathways present potential targets for therapeutic intervention. Here, we determined the crystal structure of GDP-6-OMe-4-keto-L-xylo-heptose reductase (MlghC), an enzyme within the L-gluco-heptose synthesis pathway of C. jejuni strain NCTC 11168. This enzyme lacks the canonical tyrosine residue of the conserved catalytic Ser-Lys-Tyr triad commonly found among functionally related reductases. Despite adopting the overall two-domain fold shared with other short-chain dehydrogenase/reductase family members, subtle structural differences in the interface between the cofactor- and substrate-binding domains explain the absence of epimerase activity and different substrate specificity of this reductase. Modeling of the product-bound complex based on the crystal structure presented here suggests that a tyrosine residue unique to MlghC replaces the missing canonical residue of the catalytic triad. | ||
- | + | Crystal structure of a GDP-6-OMe-4-keto-L-xylo-heptose reductase from Campylobacter jejuni.,Kim JH, Hofmann A, Kim JS Proteins. 2021 Mar 31. doi: 10.1002/prot.26080. PMID:33792088<ref>PMID:33792088</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: Kim | + | <div class="pdbe-citations 7cxt" style="background-color:#fffaf0;"></div> |
- | [[Category: Kim | + | == References == |
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Kim JH]] | ||
+ | [[Category: Kim JS]] |
Current revision
Crystal structure of a GDP-6-OMe-4-keto-L-xylo-heptose reductase from C.jejuni
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