This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6ksh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:42, 22 November 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='6ksh' size='340' side='right'caption='[[6ksh]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='6ksh' size='340' side='right'caption='[[6ksh]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6ksh]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Plaf7 Plaf7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KSH OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6KSH FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6ksh]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6KSH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6KSH FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OXL:OXALATE+ION'>OXL</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PF3D7_0626800 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=36329 PLAF7])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=OXL:OXALATE+ION'>OXL</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pyruvate_kinase Pyruvate kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.40 2.7.1.40] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ksh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ksh OCA], [https://pdbe.org/6ksh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ksh RCSB], [https://www.ebi.ac.uk/pdbsum/6ksh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ksh ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6ksh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ksh OCA], [http://pdbe.org/6ksh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6ksh RCSB], [http://www.ebi.ac.uk/pdbsum/6ksh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6ksh ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/C6KTA4_PLAF7 C6KTA4_PLAF7]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 18: Line 19:
</div>
</div>
<div class="pdbe-citations 6ksh" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6ksh" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Pyruvate kinase 3D structures|Pyruvate kinase 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 23: Line 27:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Plaf7]]
+
[[Category: Plasmodium falciparum 3D7]]
-
[[Category: Pyruvate kinase]]
+
[[Category: Cai Q]]
-
[[Category: Cai, Q]]
+
[[Category: Dedon PC]]
-
[[Category: Dedon, P C]]
+
[[Category: Lescar J]]
-
[[Category: Lescar, J]]
+
[[Category: Li K]]
-
[[Category: Li, K]]
+
[[Category: Zhong W]]
-
[[Category: Zhong, W]]
+
-
[[Category: Allostery]]
+
-
[[Category: Glycolysis]]
+
-
[[Category: Tetramer]]
+
-
[[Category: Transferase]]
+

Current revision

Crystal structure of pyruvate kinase (PYK) from Plasmodium falciparum in complex with oxalate and ATP

PDB ID 6ksh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6ksh"
Personal tools