6wt8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:39, 23 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
==Structure of a STING-associated CdnE c-di-GMP synthase from Flavobacteriaceae sp.==
+
==Structure of a STING-associated CdnE c-di-GMP synthase from Flacobacteriaceae sp.==
<StructureSection load='6wt8' size='340' side='right'caption='[[6wt8]], [[Resolution|resolution]] 1.52&Aring;' scene=''>
<StructureSection load='6wt8' size='340' side='right'caption='[[6wt8]], [[Resolution|resolution]] 1.52&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6wt8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Flavobacteriaceae_bacterium Flavobacteriaceae bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WT8 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6WT8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6WT8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6WT8 FirstGlance]. <br>
-
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.52&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6wt8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wt8 OCA], [http://pdbe.org/6wt8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6wt8 RCSB], [http://www.ebi.ac.uk/pdbsum/6wt8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6wt8 ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6wt8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6wt8 OCA], [https://pdbe.org/6wt8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6wt8 RCSB], [https://www.ebi.ac.uk/pdbsum/6wt8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6wt8 ProSAT]</span></td></tr>
</table>
</table>
-
<div style="background-color:#fffaf0;">
 
-
== Publication Abstract from PubMed ==
 
-
Stimulator of interferon genes (STING) is a receptor in human cells that senses foreign cyclic dinucleotides released during bacterial infection and endogenous cyclic GMP-AMP signalling during viral infection and antitumour immunity(1-5). STING shares no structural homology with other known signalling proteins(6-9), limiting functional analysis and preventing explanation of the origin of cyclic dinucleotide signalling in mammalian innate immunity. Here we discover functional STING homologues encoded within prokaryotic defence islands and reveal a conserved mechanism of signal activation. Crystal structures of bacterial STING define a minimal homodimeric scaffold that selectively responds to c-di-GMP synthesized by a neighbouring cGAS/DncV-like nucleotidyltransferase (CD-NTase) enzyme. Bacterial STING domains couple cyclic dinucleotide recognition with protein filament formation to drive TIR effector domain oligomerization and rapid NAD(+) cleavage. We reconstruct the evolutionary events following acquisition of STING into metazoan innate immunity and determine the structure of a full-length TIR-STING fusion from the Pacific oyster Crassostrea gigas. Comparative structural analysis demonstrates how metazoan-specific additions to the core STING scaffold enabled a switch from direct effector function to regulation of antiviral transcription. Together, our results explain the mechanism of STING-dependent signalling and reveal conservation of a functional cGAS-STING pathway in prokaryotic bacteriophage defence.
 
- 
-
STING cyclic dinucleotide sensing originated in bacteria.,Morehouse BR, Govande AA, Millman A, Keszei AFA, Lowey B, Ofir G, Shao S, Sorek R, Kranzusch PJ Nature. 2020 Sep 2. pii: 10.1038/s41586-020-2719-5. doi:, 10.1038/s41586-020-2719-5. PMID:32877915<ref>PMID:32877915</ref>
 
- 
-
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
-
</div>
 
-
<div class="pdbe-citations 6wt8" style="background-color:#fffaf0;"></div>
 
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Flavobacteriaceae bacterium]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Govande, A A]]
+
[[Category: Govande AA]]
-
[[Category: Keszei, A F.A]]
+
[[Category: Keszei AFA]]
-
[[Category: Kranzusch, P J]]
+
[[Category: Kranzusch PJ]]
-
[[Category: Lowey, B]]
+
[[Category: Lowey B]]
-
[[Category: Millman, A]]
+
[[Category: Millman A]]
-
[[Category: Morehouse, B R]]
+
[[Category: Morehouse BR]]
-
[[Category: Ofir, G]]
+
[[Category: Ofir G]]
-
[[Category: Shao, S]]
+
[[Category: Shao S]]
-
[[Category: Sorek, R]]
+
[[Category: Sorek R]]
-
[[Category: C-di-gmp]]
+
-
[[Category: Cbass]]
+
-
[[Category: Cd-ntase]]
+
-
[[Category: Sting]]
+
-
[[Category: Transferase]]
+

Current revision

Structure of a STING-associated CdnE c-di-GMP synthase from Flacobacteriaceae sp.

PDB ID 6wt8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools