2wly

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:02, 23 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='2wly' size='340' side='right'caption='[[2wly]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
<StructureSection load='2wly' size='340' side='right'caption='[[2wly]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2wly]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_marcescens"_(bizio_1823)_trevisan_in_de_toni_and_trevisan_1889 "bacillus marcescens" (bizio 1823) trevisan in de toni and trevisan 1889]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WLY OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=2WLY FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2wly]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Serratia_marcescens Serratia marcescens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WLY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WLY FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene>, <scene name='pdbligand=NGT:3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL'>NGT</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SN5:2-DEOXY-2-(ETHANETHIOYLAMINO)-BETA-D-GLUCOPYRANOSE'>SN5</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ehn|1ehn]], [[1nh6|1nh6]], [[1ffq|1ffq]], [[1x6n|1x6n]], [[1ctn|1ctn]], [[1eib|1eib]], [[1rd6|1rd6]], [[1x6l|1x6l]], [[1k9t|1k9t]], [[1ffr|1ffr]], [[2wk2|2wk2]], [[2wlz|2wlz]], [[2wm0|2wm0]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene>, <scene name='pdbligand=NGT:3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL'>NGT</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=SN5:2-DEOXY-2-(ETHANETHIOYLAMINO)-BETA-D-GLUCOPYRANOSE'>SN5</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=2wly FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wly OCA], [http://pdbe.org/2wly PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wly RCSB], [http://www.ebi.ac.uk/pdbsum/2wly PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wly ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wly FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wly OCA], [https://pdbe.org/2wly PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wly RCSB], [https://www.ebi.ac.uk/pdbsum/2wly PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wly ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CHIA_SERMA CHIA_SERMA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wl/2wly_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wl/2wly_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 24: Line 26:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Davies, G J]]
+
[[Category: Serratia marcescens]]
-
[[Category: Dennis, R J]]
+
[[Category: Davies GJ]]
-
[[Category: Knapp, S]]
+
[[Category: Dennis RJ]]
-
[[Category: Macdonald, J M]]
+
[[Category: Knapp S]]
-
[[Category: Tarling, C A]]
+
[[Category: Macdonald JM]]
-
[[Category: Taylor, E J]]
+
[[Category: Tarling CA]]
-
[[Category: Withers, S G]]
+
[[Category: Taylor EJ]]
-
[[Category: Carbohydrate metabolism]]
+
[[Category: Withers SG]]
-
[[Category: Chitin degradation]]
+
-
[[Category: Chitin hydrolysis]]
+
-
[[Category: Chitinase some]]
+
-
[[Category: Family 18 chitinase]]
+
-
[[Category: Glycosidase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Polysaccharide degradation]]
+
-
[[Category: Thiazoline]]
+

Current revision

Chitinase A from Serratia marcescens ATCC990 in complex with Chitotrio-thiazoline.

PDB ID 2wly

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2wly"
Personal tools