This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5x6e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:17, 27 March 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5x6e' size='340' side='right'caption='[[5x6e]], [[Resolution|resolution]] 2.99&Aring;' scene=''>
<StructureSection load='5x6e' size='340' side='right'caption='[[5x6e]], [[Resolution|resolution]] 2.99&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5x6e]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacterium_monocytogenes_hominis"_nyfeldt_1932 "bacterium monocytogenes hominis" nyfeldt 1932]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X6E OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5X6E FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5x6e]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X6E OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5X6E FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.99&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5x6d|5x6d]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GSH:GLUTATHIONE'>GSH</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">prfA, AJL40_05990, AJN46_04535, M643_11230 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1639 "Bacterium monocytogenes hominis" Nyfeldt 1932])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5x6e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x6e OCA], [https://pdbe.org/5x6e PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5x6e RCSB], [https://www.ebi.ac.uk/pdbsum/5x6e PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5x6e ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5x6e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x6e OCA], [http://pdbe.org/5x6e PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5x6e RCSB], [http://www.ebi.ac.uk/pdbsum/5x6e PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5x6e ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PRFA_LISMO PRFA_LISMO] Positively regulates expression of listeriolysin, of 1-phosphadidylinositol phosphodiesterase (PI-PLC) and other virulence factors.
==See Also==
==See Also==
-
*[[Listeriolysin positive regulatory factor A|Listeriolysin positive regulatory factor A]]
+
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Bacterium monocytogenes hominis nyfeldt 1932]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Feng, H]]
+
[[Category: Listeria monocytogenes]]
-
[[Category: Gao, P]]
+
[[Category: Feng H]]
-
[[Category: Wang, Y]]
+
[[Category: Gao P]]
-
[[Category: Zhu, Y L]]
+
[[Category: Wang Y]]
-
[[Category: Dna binding protein-dna complex]]
+
[[Category: Zhu YL]]
-
[[Category: Dna complex]]
+

Current revision

Crystal structure of PrfA-DNA binary complex

PDB ID 5x6e

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools