This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5xb0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:58, 22 November 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='5xb0' size='340' side='right'caption='[[5xb0]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='5xb0' size='340' side='right'caption='[[5xb0]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5xb0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Psesm Psesm]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3oe2 3oe2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XB0 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=5XB0 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5xb0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato_str._DC3000 Pseudomonas syringae pv. tomato str. DC3000]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3oe2 3oe2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5XB0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5XB0 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PSPTO_0135 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=223283 PSESM])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TLA:L(+)-TARTARIC+ACID'>TLA</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidylprolyl_isomerase Peptidylprolyl isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.2.1.8 5.2.1.8] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5xb0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xb0 OCA], [https://pdbe.org/5xb0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5xb0 RCSB], [https://www.ebi.ac.uk/pdbsum/5xb0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5xb0 ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=5xb0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5xb0 OCA], [http://pdbe.org/5xb0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5xb0 RCSB], [http://www.ebi.ac.uk/pdbsum/5xb0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5xb0 ProSAT]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q88B84_PSESM Q88B84_PSESM]
==See Also==
==See Also==
Line 15: Line 16:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Peptidylprolyl isomerase]]
+
[[Category: Pseudomonas syringae pv. tomato str. DC3000]]
-
[[Category: Psesm]]
+
[[Category: Chang W]]
-
[[Category: Chang, W]]
+
[[Category: Gao Y]]
-
[[Category: Gao, Y]]
+
[[Category: Li M]]
-
[[Category: Li, M]]
+
[[Category: Zhang H]]
-
[[Category: Zhang, H]]
+
-
[[Category: Fkbp]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Ppiase]]
+
-
[[Category: Pspto-ppiase]]
+

Current revision

1.6 A crystal structure of peptidyl-prolyl cis-trans isomerase PPIase from Pseudomonas syringae pv. tomato str. DC3000 (PSPTO DC3000)

PDB ID 5xb0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools