Proline utilization A

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Current revision (10:15, 1 February 2022) (edit) (undo)
 
Line 15: Line 15:
**[[4nm9]] – GsPutA + FAD – ''Geobacter sulfurreducens'' <br />
**[[4nm9]] – GsPutA + FAD – ''Geobacter sulfurreducens'' <br />
 +
**[[7na0]] – GsPutA (mutant) + FAD <br />
**[[4nma]] – GsPutA + FAD + tetrahydrofuran derivative <br />
**[[4nma]] – GsPutA + FAD + tetrahydrofuran derivative <br />
**[[2gpe]] – EcPutA DNA-binding domain <br />
**[[2gpe]] – EcPutA DNA-binding domain <br />
**[[2ay0]] – EcPutA DNA-binding domain (mutant)<br />
**[[2ay0]] – EcPutA DNA-binding domain (mutant)<br />
-
**[[4q71]], [[4q72]], [[4q73]] – PutA (mutant) + FAD – ''Bradyrhizobium diazoefficiens''<br />
+
**[[4q71]], [[4q72]], [[4q73]] – BdPutA (mutant) + FAD – ''Bradyrhizobium diazoefficiens''<br />
**[[4h6r]] – DrPutA + FAD – ''Deinococcus radiodurans''<br />
**[[4h6r]] – DrPutA + FAD – ''Deinococcus radiodurans''<br />
**[[2gpe]] - EcPutA DNA-binding domain - ''Escherichia coli''<br />
**[[2gpe]] - EcPutA DNA-binding domain - ''Escherichia coli''<br />
**[[2jxg]], [[2jxh]] - PpPutA DNA-binding domain - ''Pseudomonas putida'' - NMR<br />
**[[2jxg]], [[2jxh]] - PpPutA DNA-binding domain - ''Pseudomonas putida'' - NMR<br />
 +
**[[6ufp]], [[6vz9]] – SmPutA (mutant) + FAD – ''Sinorhizobium melioli''<br />
*PutA complex
*PutA complex
-
**[[6bsn]] – hPutA + FAD derivative + Pro - human<br />
 
**[[4nmb]] – GsPutA + FAD + lactate <br />
**[[4nmb]] – GsPutA + FAD + lactate <br />
**[[4nmc]] – GsPutA + FAD + zwittergent <br />
**[[4nmc]] – GsPutA + FAD + zwittergent <br />
Line 47: Line 48:
**[[2jxi]] - PpPutA DNA-binding domain + DNA<br />
**[[2jxi]] - PpPutA DNA-binding domain + DNA<br />
**[[5ur2]] - PutA + FAD derivative + inhibitor - ''Bdellovibrio bacteriovorus''<br />
**[[5ur2]] - PutA + FAD derivative + inhibitor - ''Bdellovibrio bacteriovorus''<br />
 +
**[[6x9a]], [[6x9b]], [[6x9c]], [[6x9d]] – SmPutA + FAD + proline derivative <br />
 +
**[[6x99]] – SmPutA + FAD + Glu derivative <br />
 +
**[[7my9]], [[7mya]], [[7myb]], [[7myc]] – SmPutA + FAD + dithiolane <br />
 +
**[[6bsn]] – BdPutA + FAD + proline<br />
}}
}}

Current revision

E. coli PutA proline dehydrogenase domain with cofactor FAD complex with hydroxyproline (PDB code 3e2q)

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3D Structures of proline utilization A

Updated on 01-February-2022

References

  1. Srivastava D, Zhu W, Johnson WH, Whitman CP, Becker DF, Tanner JJ. The Structure of the Proline Utilization A Proline Dehydrogenase Domain Inactivated by N-Propargylglycine Provides Insight into Conformational Changes Induced by Substrate Binding and Flavin Reduction (,). Biochemistry. 2009 Dec 29. PMID:19994913 doi:10.1021/bi901717s
  2. Ostrander EL, Larson JD, Schuermann JP, Tanner JJ. A Conserved Active Site Tyrosine Residue of Proline Dehydrogenase Helps Enforce the Preference for Proline over Hydroxyproline as the Substrate (dagger) (double dagger). Biochemistry. 2009 Feb 10;48(5):951-9. PMID:19140736 doi:10.1021/bi802094k

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman

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