7jsy
From Proteopedia
(Difference between revisions)
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==Proteinase K soaked with I3C determined by MicroED from a single milled microcrystal== | ==Proteinase K soaked with I3C determined by MicroED from a single milled microcrystal== | ||
| - | <StructureSection load='7jsy' size='340' side='right'caption='[[7jsy]]' scene=''> | + | <StructureSection load='7jsy' size='340' side='right'caption='[[7jsy]], [[Resolution|resolution]] 1.78Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7JSY OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7JSY FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[7jsy]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7JSY OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=7JSY FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7jsy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7jsy OCA], [http://pdbe.org/7jsy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7jsy RCSB], [http://www.ebi.ac.uk/pdbsum/7jsy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7jsy ProSAT]</span></td></tr> | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=I3C:5-AMINO-2,4,6-TRIIODOBENZENE-1,3-DICARBOXYLIC+ACID'>I3C</scene></td></tr> |
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidase_K Peptidase K], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.64 3.4.21.64] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=7jsy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7jsy OCA], [http://pdbe.org/7jsy PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=7jsy RCSB], [http://www.ebi.ac.uk/pdbsum/7jsy PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=7jsy ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/PRTK_PARAQ PRTK_PARAQ]] Hydrolyzes keratin at aromatic and hydrophobic residues. | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | A high throughout method for soaking ligands into protein microcrystals on TEM grids is presented. Every crystal on the grid is soaked simultaneously using only standard cryoelectron microscopy vitrification equipment. The method is demonstrated using proteinase K microcrystals soaked with the 5-amino-2,4,6-triodoisophthalic acid (I3C) magic triangle. A soaked microcrystal is milled to a thickness of approximately 200 nm using a focused ion beam, and MicroED data are collected. A high-resolution structure of the protein with four ligands at high occupancy is determined. Both the number of ligands bound and their occupancy is higher using on-grid soaking of microcrystals compared with much larger crystals treated similarly and investigated by X-ray crystallography. These results indicate that on-grid soaking ligands into microcrystals results in efficient uptake of ligands into protein microcrystals. | ||
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| + | Ligand Incorporation into Protein Microcrystals for MicroED by On-Grid Soaking.,Martynowycz MW, Gonen T Structure. 2020 Sep 28. pii: S0969-2126(20)30328-2. doi:, 10.1016/j.str.2020.09.003. PMID:33007196<ref>PMID:33007196</ref> | ||
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| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7jsy" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Gonen T]] | + | [[Category: Peptidase K]] |
| - | [[Category: Martynowycz | + | [[Category: Gonen, T]] |
| + | [[Category: Martynowycz, M W]] | ||
| + | [[Category: Hydrolase]] | ||
| + | [[Category: Proteinase k]] | ||
Current revision
Proteinase K soaked with I3C determined by MicroED from a single milled microcrystal
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