6avk

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Current revision (14:26, 4 October 2023) (edit) (undo)
 
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<StructureSection load='6avk' size='340' side='right'caption='[[6avk]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
<StructureSection load='6avk' size='340' side='right'caption='[[6avk]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6avk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AVK OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6AVK FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6avk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_avidinii Streptomyces avidinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6AVK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6AVK FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BZ4:N-[(2H-1,3-benzodioxol-5-yl)methyl]-2-({[(2H-1,3-benzodioxol-5-yl)methyl][2-(chloromethyl)-1,3-oxazole-4-carbonyl]amino}methyl)-N-[(4-carbamoyl-1,3-oxazol-2-yl)methyl]-1,3-oxazole-4-carboxamide'>BZ4</scene>, <scene name='pdbligand=HDO:1-hydroxydodecan-4-one'>HDO</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6avk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6avk OCA], [http://pdbe.org/6avk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6avk RCSB], [http://www.ebi.ac.uk/pdbsum/6avk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6avk ProSAT]</span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BZ4:N-[(2H-1,3-benzodioxol-5-yl)methyl]-2-({[(2H-1,3-benzodioxol-5-yl)methyl][2-(chloromethyl)-1,3-oxazole-4-carbonyl]amino}methyl)-N-[(4-carbamoyl-1,3-oxazol-2-yl)methyl]-1,3-oxazole-4-carboxamide'>BZ4</scene>, <scene name='pdbligand=HDO:1-hydroxydodecan-4-one'>HDO</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6avk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6avk OCA], [https://pdbe.org/6avk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6avk RCSB], [https://www.ebi.ac.uk/pdbsum/6avk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6avk ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV]] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin).
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[https://www.uniprot.org/uniprot/SAV_STRAV SAV_STRAV] The biological function of streptavidin is not known. Forms a strong non-covalent specific complex with biotin (one molecule of biotin per subunit of streptavidin).
==See Also==
==See Also==
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[[Category: Large Structures]]
[[Category: Large Structures]]
[[Category: Streptomyces avidinii]]
[[Category: Streptomyces avidinii]]
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[[Category: Kodadek, T]]
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[[Category: Kodadek T]]
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[[Category: McEnaney, P]]
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[[Category: McEnaney P]]
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[[Category: Park, H]]
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[[Category: Park H]]
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[[Category: Shamim, R]]
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[[Category: Shamim R]]
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[[Category: Biotin binding protein]]
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[[Category: Streptavidin]]
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Current revision

Streptavidin bound to peptide-like compound KPM-6

PDB ID 6avk

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