7av6
From Proteopedia
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| - | '''Unreleased structure''' | ||
| - | + | ==FAST in a domain-swapped dimer form== | |
| + | <StructureSection load='7av6' size='340' side='right'caption='[[7av6]], [[Resolution|resolution]] 1.50Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[7av6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Halorhodospira_halophila Halorhodospira halophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7AV6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7AV6 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7av6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7av6 OCA], [https://pdbe.org/7av6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7av6 RCSB], [https://www.ebi.ac.uk/pdbsum/7av6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7av6 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PYP_HALHA PYP_HALHA] Photoactive blue light protein. Probably functions as a photoreceptor for a negative phototaxis response. | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | One of the essential characteristics of any tag used in bioscience and medical applications is its size. The larger the label, the more it may affect the studied object, and the more it may distort its behavior. In this paper, using NMR spectroscopy and X-ray crystallography, we have studied the structure of fluorogen-activating protein FAST both in the apo form and in complex with the fluorogen. We showed that significant change in the protein occurs upon interaction with the ligand. While the protein is completely ordered in the complex, its apo form is characterized by higher mobility and disordering of its N-terminus. We used structural information to design the shortened FAST (which we named nanoFAST) by truncating 26 N-terminal residues. Thus, we created the shortest genetically encoded tag among all known fluorescent and fluorogen-activating proteins, which is composed of only 98 amino acids. | ||
| - | + | NanoFAST: structure-based design of a small fluorogen-activating protein with only 98 amino acids.,Mineev KS, Goncharuk SA, Goncharuk MV, Povarova NV, Sokolov AI, Baleeva NS, Smirnov AY, Myasnyanko IN, Ruchkin DA, Bukhdruker S, Remeeva A, Mishin A, Borshchevskiy V, Gordeliy V, Arseniev AS, Gorbachev DA, Gavrikov AS, Mishin AS, Baranov MS Chem Sci. 2021 Apr 8;12(19):6719-6725. doi: 10.1039/d1sc01454d. PMID:34040747<ref>PMID:34040747</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| + | <div class="pdbe-citations 7av6" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Halorhodospira halophila]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Baranov M]] | ||
| + | [[Category: Borshchevskiy V]] | ||
| + | [[Category: Bukhdruker S]] | ||
| + | [[Category: Goncharuk S]] | ||
| + | [[Category: Gorbachev D]] | ||
| + | [[Category: Mineev K]] | ||
| + | [[Category: Mishin A]] | ||
| + | [[Category: Povarova N]] | ||
| + | [[Category: Remeeva A]] | ||
| + | [[Category: Ruchkin D]] | ||
Current revision
FAST in a domain-swapped dimer form
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