Transposase 3D structures
From Proteopedia
(Difference between revisions)
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**[[2ezk]], [[2ezl]] – MuMuA Iβ subdomain - NMR<br /> | **[[2ezk]], [[2ezl]] – MuMuA Iβ subdomain - NMR<br /> | ||
**[[4fcy]] – MuMuA + DNA <br /> | **[[4fcy]] – MuMuA + DNA <br /> | ||
| + | **[[1f6v]] – MuA C terminal – Escherichia virus Mu - NMR<br /> | ||
*Hermes transposase | *Hermes transposase | ||
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**[[2bw3]] – fTra (mutant) - fly<br /> | **[[2bw3]] – fTra (mutant) - fly<br /> | ||
**[[4d1q]], [[6dx0]], [[6dww]], [[6dwy]], [[6dwz]] – fTra (mutant) + DNA <br /> | **[[4d1q]], [[6dx0]], [[6dww]], [[6dwy]], [[6dwz]] – fTra (mutant) + DNA <br /> | ||
| + | **[[8eb5]] – fTra BED domain 1-78 (mutant) + DNA <br /> | ||
| + | **[[8edg]], [[8sjd]] – fTra (mutant) + DNA – Cryo EM<br /> | ||
*Dra2 transposase | *Dra2 transposase | ||
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**[[2xma]], [[2xqc]] – Dra2 + DNA <br /> | **[[2xma]], [[2xqc]] – Dra2 + DNA <br /> | ||
**[[2xo6]] – Dra2 (mutant) + DNA <br /> | **[[2xo6]] – Dra2 (mutant) + DNA <br /> | ||
| + | |||
| + | *Tn3 transposase | ||
| + | |||
| + | **[[7qd8]] – BtTn5 – ''Bacillus thuringiensis'' – Cryo EM<br /> | ||
| + | **[[7qd4]], [[7qd5]], [[7qd6]] – BtTn5 (mutant) + DNA – Cryo EM<br /> | ||
*Tn5 transposase | *Tn5 transposase | ||
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*Tn7 transposase | *Tn7 transposase | ||
| - | **[[5d17]] – EcTn7 C terminal <br /> | + | **[[1f1z]] – EcTn7 tnsA <br /> |
| - | **[[5d16]] – EcTn7 C terminal (mutant) <br /> | + | **[[5d17]] – EcTn7 tnsE C terminal <br /> |
| + | **[[5d16]] – EcTn7 tnsE C terminal (mutant) <br /> | ||
| + | **[[1t0f]] – EcTn7 tnsA + tnsC <br /> | ||
| + | **[[7m9a]], [[7m9b]], [[7m9c]] – hTn7 tnsC + DNA + ADP – Cryo EM <br /> | ||
| + | **[[8aa5]] – ShTn7 tnsB + DNA – ''Scytonema hofmannii'' - Cryo EM <br /> | ||
| + | **[[7n6i]] – ShTn7 tnsC + TniQ + DNA + ATP' - Cryo EM <br /> | ||
| + | **[[7m99]] – ShTn7 tnsC + DNA + ATPgS - Cryo EM <br /> | ||
| + | **[[7plh]] – ShTn7 tnsC + DNA + AMPPNP Cryo EM <br /> | ||
| + | **[[7pla]] – ShTn7 cas12k + DNA + RNA - Cryo EM <br /> | ||
*Mos1 transposase | *Mos1 transposase | ||
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**[[5cr4]] – SB catalytic domain – synthetic<br /> | **[[5cr4]] – SB catalytic domain – synthetic<br /> | ||
**[[2m8e]] – SB PAI domain – synthetic - NMR<br /> | **[[2m8e]] – SB PAI domain – synthetic - NMR<br /> | ||
| - | **[[5unk]] – | + | **[[5unk]] – OmRED domain – ''Oncorhynchus mykiss'' - NMR<br /> |
| + | **[[6urs]] – OmSB PAI domain - NMR<br /> | ||
*DNA-mediated transposase | *DNA-mediated transposase | ||
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*Piggyback transposase | *Piggyback transposase | ||
| - | **[[5lme]] – | + | **[[6x68]], [[6x67]] – clPBT + DNA – cabbage looper – Cryo EM<br /> |
| + | **[[5lme]] – clPBT C terminal - NMR<br /> | ||
| + | **[[6zop]] – PBT Cys-rich domain 692-768 – ''Paramecium tetraaurelia'' - NMR<br /> | ||
| + | |||
| + | *ISC transposase | ||
| + | |||
| + | **[[6xg8]], [[6xgx]], [[6xgw]] – ISC + DNA – ''Hungateiclostridium thermocellum''<br /> | ||
| + | **[[6dgc]] – ISC C-terminal catalytic domain - ''Sulfolobus'' <br /> | ||
| + | |||
| + | *TniQ transposase | ||
| + | |||
| + | **[[6lnd]], [[6v9p]] – VcTniQ – ''Vibrio Cholerae'' <br /> | ||
| + | **[[6lnc]], [[6lnb]], [[6pig]], [[6pif]], [[6pij]], [[6uvn]] – VcTniQ + Cas6 + Cas7 + Cas8 + RNA – Cryo EM<br /> | ||
| + | **[[7oxd]] – ShTn7 TniqQ<br /> | ||
| + | |||
| + | *Heltiron transposase | ||
| + | |||
| + | **[[7lcc]] – HT + DNA – bat – Cryo EM<br /> | ||
}} | }} | ||
[[Category:Topic Page]] | [[Category:Topic Page]] | ||
Current revision
3D structures of transposase
Updated on 22-January-2024 - For a general description of the protein see Transposase
