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7b7c

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(New page: '''Unreleased structure''' The entry 7b7c is ON HOLD Authors: Gajdos, L., Blakeley, M.P., Kumar, A., Wimmerova, M., Haertlein, M., Forsyth, V.T., Imberty, A., Devos, J.M. Description: ...)
Current revision (12:22, 1 February 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 7b7c is ON HOLD
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==Room temperature X-ray structure of perdeuterated PLL lectin in complex with L-fucose==
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<StructureSection load='7b7c' size='340' side='right'caption='[[7b7c]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7b7c]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Photorhabdus_laumondii Photorhabdus laumondii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7B7C OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7B7C FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FUC:ALPHA-L-FUCOSE'>FUC</scene>, <scene name='pdbligand=FUL:BETA-L-FUCOSE'>FUL</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7b7c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7b7c OCA], [https://pdbe.org/7b7c PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7b7c RCSB], [https://www.ebi.ac.uk/pdbsum/7b7c PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7b7c ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q7N8J0_PHOLL Q7N8J0_PHOLL]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Carbohydrate-binding proteins from pathogenic bacteria and fungi have been shown to be implicated in various pathological processes, where they interact with glycans present on the surface of the host cells. These interactions are part of the initial processes of infection of the host and are very important to study at the atomic level. Here, we report the room temperature neutron structures of PLL lectin from Photorhabdus laumondii in its apo form and in complex with deuterated L-fucose, which is, to our knowledge, the first neutron structure of a carbohydrate-binding protein in complex with a fully deuterated carbohydrate ligand. A detailed structural analysis of the lectin-carbohydrate interactions provides information on the hydrogen bond network, the role of water molecules, and the extent of the CH-pi stacking interactions between fucose and the aromatic amino acids in the binding site.
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Authors: Gajdos, L., Blakeley, M.P., Kumar, A., Wimmerova, M., Haertlein, M., Forsyth, V.T., Imberty, A., Devos, J.M.
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Visualization of hydrogen atoms in a perdeuterated lectin-fucose complex reveals key details of protein-carbohydrate interactions.,Gajdos L, Blakeley MP, Kumar A, Wimmerova M, Haertlein M, Forsyth VT, Imberty A, Devos JM Structure. 2021 Mar 24. pii: S0969-2126(21)00076-9. doi:, 10.1016/j.str.2021.03.003. PMID:33765407<ref>PMID:33765407</ref>
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Description: Room temperature X-ray structure of perdeuterated PLL lectin in complex with L-fucose
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Haertlein, M]]
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<div class="pdbe-citations 7b7c" style="background-color:#fffaf0;"></div>
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[[Category: Blakeley, M.P]]
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== References ==
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[[Category: Wimmerova, M]]
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<references/>
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[[Category: Kumar, A]]
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__TOC__
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[[Category: Gajdos, L]]
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</StructureSection>
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[[Category: Forsyth, V.T]]
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[[Category: Large Structures]]
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[[Category: Devos, J.M]]
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[[Category: Photorhabdus laumondii]]
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[[Category: Imberty, A]]
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[[Category: Blakeley MP]]
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[[Category: Devos JM]]
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[[Category: Forsyth VT]]
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[[Category: Gajdos L]]
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[[Category: Haertlein M]]
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[[Category: Imberty A]]
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[[Category: Kumar A]]
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[[Category: Wimmerova M]]

Current revision

Room temperature X-ray structure of perdeuterated PLL lectin in complex with L-fucose

PDB ID 7b7c

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