7jgy
From Proteopedia
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<StructureSection load='7jgy' size='340' side='right'caption='[[7jgy]]' scene=''> | <StructureSection load='7jgy' size='340' side='right'caption='[[7jgy]]' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full | + | <table><tr><td colspan='2'>[[7jgy]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Parachartergus_fraternus Parachartergus fraternus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7JGY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7JGY FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7jgy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7jgy OCA], [https://pdbe.org/7jgy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7jgy RCSB], [https://www.ebi.ac.uk/pdbsum/7jgy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7jgy ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PROTO_AGEPP PROTO_AGEPP] Shows potent antimicrobial action against both Gram-positive and Gram-negative bacteria (MIC=25 ug/ml or 32-63 uM against E.coli, MIC=1.7 ug/ml against P.aeruginosa, MIC=3.1 ug/ml or 4 uM against B.subtilis, MIC=8 uM against S.epidermis, and MIC=12.5 ug/ml or 8 uM against S.aureus) (PubMed:15225564, PubMed:23836163). Acts by disrupting the integrity of the outer and inner bacterial membranes (Probable). Adopts an amphipathic alpha helical conformation in membrane that is essential for the membrane disrupting activity (PubMed:23836163). Mast cell degranulator that induces a potent chemotaxis in polymorphonucleated leukocyte (PMNL) cells (PubMed:15052574, PubMed:15225564). Shows no or weak hemolytic activity (PubMed:15052574, PubMed:15225564).<ref>PMID:15052574</ref> <ref>PMID:15225564</ref> <ref>PMID:23836163</ref> <ref>PMID:23836163</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Agelaia-MPI and protonectin are antimicrobial peptides isolated from the wasp Parachartergus fraternus that show antimicrobial and neuroactive activities. Previously, two analogues of these peptides, neuroVAL and protonectin-F were designed to reduce nonspecific toxicity and improve potency. Here, the three-dimensional structures of neuroVAL, protonectin and protonectin-F were determined using circular dichroism and NMR spectroscopy. Antibacterial, antifungal and cytotoxic and hemolytic activities were tested for the parent peptides and analogues. All peptides showed moderate antimicrobial activity against Gram-positive bacteria, with agelaia-MPI being the most active. Protonectin and protonectin-F were found to be toxic to cancerous and non-cancerous cell lines. Internalization experiments revealed that these peptides accumulate inside both cell types. By contrast, neuroVAL was nontoxic to all tested cells and was able to enter cells without accumulating. In summary, neuroVAL has potential as a non-toxic cell penetrating peptide, while protonectin-F needs further modification to realize its potential as an antitumor peptide. | ||
| + | |||
| + | Antimicrobial and Anticancer Properties of Synthetic Peptides Derived from the Wasp Parachartergus fraternus.,Muller JAI, Lawrence N, Chan LY, Harvey PJ, Elliott AG, Blaskovich MAT, Goncalves JC, Galante P, Mortari MR, Toffoli-Kadri MC, Koehbach J, Craik D Chembiochem. 2020 Nov 26. doi: 10.1002/cbic.202000716. PMID:33244888<ref>PMID:33244888</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7jgy" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| + | [[Category: Parachartergus fraternus]] | ||
[[Category: Craik DJ]] | [[Category: Craik DJ]] | ||
[[Category: Koehbach J]] | [[Category: Koehbach J]] | ||
[[Category: Muller JAI]] | [[Category: Muller JAI]] | ||
Current revision
Solution NMR structure of protonectin, a peptide from wasp
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