This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1s6i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:07, 22 May 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Ca2+-regulatory region (CLD) from soybean calcium-dependent protein kinase-alpha (CDPK) in the presence of Ca2+ and the junction domain (JD)==
==Ca2+-regulatory region (CLD) from soybean calcium-dependent protein kinase-alpha (CDPK) in the presence of Ca2+ and the junction domain (JD)==
-
<StructureSection load='1s6i' size='340' side='right'caption='[[1s6i]], [[NMR_Ensembles_of_Models | 15 NMR models]]' scene=''>
+
<StructureSection load='1s6i' size='340' side='right'caption='[[1s6i]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1s6i]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Glycine_hispida Glycine hispida]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S6I OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1S6I FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1s6i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Glycine_max Glycine max]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S6I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S6I FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1s6j|1s6j]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CDPK SK5 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3847 Glycine hispida])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s6i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s6i OCA], [https://pdbe.org/1s6i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s6i RCSB], [https://www.ebi.ac.uk/pdbsum/1s6i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s6i ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1s6i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s6i OCA], [http://pdbe.org/1s6i PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1s6i RCSB], [http://www.ebi.ac.uk/pdbsum/1s6i PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1s6i ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CDPK_SOYBN CDPK_SOYBN]] May play a role in signal transduction pathways that involve calcium as a second messenger.
+
[https://www.uniprot.org/uniprot/CDPK_SOYBN CDPK_SOYBN] May play a role in signal transduction pathways that involve calcium as a second messenger.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 37: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Glycine hispida]]
+
[[Category: Glycine max]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Vogel, H J]]
+
[[Category: Vogel HJ]]
-
[[Category: Weljie, A M]]
+
[[Category: Weljie AM]]
-
[[Category: Calcium-binding]]
+
-
[[Category: Calmodulin superfamily]]
+
-
[[Category: Ef-hand]]
+
-
[[Category: Helix-loop-helix]]
+
-
[[Category: Plant protein]]
+
-
[[Category: Transferase]]
+

Current revision

Ca2+-regulatory region (CLD) from soybean calcium-dependent protein kinase-alpha (CDPK) in the presence of Ca2+ and the junction domain (JD)

PDB ID 1s6i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools