This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1sgv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:16, 23 August 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='1sgv' size='340' side='right'caption='[[1sgv]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='1sgv' size='340' side='right'caption='[[1sgv]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1sgv]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Myctu Myctu]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1s71 1s71]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SGV OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1SGV FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1sgv]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Rv Mycobacterium tuberculosis H37Rv]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1s71 1s71]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SGV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SGV FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TRUB, RV2793C, MT2862.1, MTV002.58C, MB2816C ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83332 MYCTU])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Pseudouridylate_synthase Pseudouridylate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.70 4.2.1.70] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sgv OCA], [https://pdbe.org/1sgv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sgv RCSB], [https://www.ebi.ac.uk/pdbsum/1sgv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sgv ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1sgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sgv OCA], [http://pdbe.org/1sgv PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1sgv RCSB], [http://www.ebi.ac.uk/pdbsum/1sgv PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1sgv ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TRUB_MYCTU TRUB_MYCTU]] Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (By similarity).
+
[https://www.uniprot.org/uniprot/TRUB_MYCTU TRUB_MYCTU] Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 38: Line 37:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Myctu]]
+
[[Category: Mycobacterium tuberculosis H37Rv]]
-
[[Category: Pseudouridylate synthase]]
+
[[Category: Chan S]]
-
[[Category: Chan, S]]
+
[[Category: Chaudhuri BN]]
-
[[Category: Chaudhuri, B N]]
+
[[Category: Perry LJ]]
-
[[Category: Perry, L J]]
+
[[Category: Yeates TO]]
-
[[Category: Structural genomic]]
+
-
[[Category: Yeates, T O]]
+
-
[[Category: Hinged motion]]
+
-
[[Category: Lyase]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Tbsgc]]
+
-
[[Category: Trna modification]]
+

Current revision

STRUCTURE OF TRNA PSI55 PSEUDOURIDINE SYNTHASE (TRUB)

PDB ID 1sgv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1sgv"
Personal tools