6z8g

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'''Unreleased structure'''
 
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The entry 6z8g is ON HOLD until Paper Publication
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==Crystal structure of VSG13 soaked in 0.5 M used to phase VSG13 to solve the structure.==
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<StructureSection load='6z8g' size='340' side='right'caption='[[6z8g]], [[Resolution|resolution]] 1.56&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6Z8G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6Z8G FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.56&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=BR:BROMIDE+ION'>BR</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6z8g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6z8g OCA], [https://pdbe.org/6z8g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6z8g RCSB], [https://www.ebi.ac.uk/pdbsum/6z8g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6z8g ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Suramin has been a primary early-stage treatment for African trypanosomiasis for nearly 100 yr. Recent studies revealed that trypanosome strains that express the variant surface glycoprotein (VSG) VSGsur possess heightened resistance to suramin. Here, we show that VSGsur binds tightly to suramin but other VSGs do not. By solving high-resolution crystal structures of VSGsur and VSG13, we also demonstrate that these VSGs define a structurally divergent subgroup of the coat proteins. The co-crystal structure of VSGsur with suramin reveals that the chemically symmetric drug binds within a large cavity in the VSG homodimer asymmetrically, primarily through contacts of its central benzene rings. Structure-based, loss-of-contact mutations in VSGsur significantly decrease the affinity to suramin and lead to a loss of the resistance phenotype. Altogether, these data show that the resistance phenotype is dependent on the binding of suramin to VSGsur, establishing that the VSG proteins can possess functionality beyond their role in antigenic variation.
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Authors: Stebbins, C.E., Hempelmann, A., Van Straaten, M., Zeelen, J.
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Structure of trypanosome coat protein VSGsur and function in suramin resistance.,Zeelen J, van Straaten M, Verdi J, Hempelmann A, Hashemi H, Perez K, Jeffrey PD, Halg S, Wiedemar N, Maser P, Papavasiliou FN, Stebbins CE Nat Microbiol. 2021 Mar;6(3):392-400. doi: 10.1038/s41564-020-00844-1. Epub 2021 , Jan 18. PMID:33462435<ref>PMID:33462435</ref>
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Description: Crystal structure of VSG13 soaked in 0.5 M used to phase VSG13 to solve the structure.
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Van Straaten, M]]
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<div class="pdbe-citations 6z8g" style="background-color:#fffaf0;"></div>
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[[Category: Hempelmann, A]]
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== References ==
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[[Category: Stebbins, C.E]]
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<references/>
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[[Category: Zeelen, J]]
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Hempelmann A]]
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[[Category: Stebbins CE]]
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[[Category: Van Straaten M]]
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[[Category: Zeelen J]]

Current revision

Crystal structure of VSG13 soaked in 0.5 M used to phase VSG13 to solve the structure.

PDB ID 6z8g

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