1ukc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:38, 23 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='1ukc' size='340' side='right'caption='[[1ukc]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='1ukc' size='340' side='right'caption='[[1ukc]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1ukc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/A._niger A. niger]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UKC OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1UKC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1ukc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_niger Aspergillus niger]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UKC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UKC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">EstA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5061 A. niger])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1ukc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ukc OCA], [http://pdbe.org/1ukc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ukc RCSB], [http://www.ebi.ac.uk/pdbsum/1ukc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ukc ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ukc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ukc OCA], [https://pdbe.org/1ukc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ukc RCSB], [https://www.ebi.ac.uk/pdbsum/1ukc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ukc ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6ED33_ASPNG Q6ED33_ASPNG]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uk/1ukc_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uk/1ukc_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 31: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: A. niger]]
+
[[Category: Aspergillus niger]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Bourne, Y]]
+
[[Category: Bourne Y]]
-
[[Category: Chahinian, H]]
+
[[Category: Chahinian H]]
-
[[Category: Graaff, L H.De]]
+
[[Category: De Graaff LH]]
-
[[Category: Hasper, A A]]
+
[[Category: Hasper AA]]
-
[[Category: Juin, M]]
+
[[Category: Juin M]]
-
[[Category: Marchot, P]]
+
[[Category: Marchot P]]
-
[[Category: A/b hydrolase fold]]
+
-
[[Category: Acetylcholinesterase]]
+
-
[[Category: Esterase]]
+
-
[[Category: Fungi]]
+
-
[[Category: Hydrolase]]
+

Current revision

Crystal Structure of Aspergillus niger EstA

PDB ID 1ukc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools