This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6yhm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:27, 24 January 2024) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6yhm' size='340' side='right'caption='[[6yhm]], [[Resolution|resolution]] 1.13&Aring;' scene=''>
<StructureSection load='6yhm' size='340' side='right'caption='[[6yhm]], [[Resolution|resolution]] 1.13&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6yhm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_pseudotuberkulosis"_(sic)_pfeiffer_1889 "bacillus pseudotuberkulosis" (sic) pfeiffer 1889]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YHM OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6YHM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6yhm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis Yersinia pseudotuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YHM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YHM FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.13&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cnf ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=633 "Bacillus pseudotuberkulosis" (sic) Pfeiffer 1889])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6yhm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yhm OCA], [http://pdbe.org/6yhm PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6yhm RCSB], [http://www.ebi.ac.uk/pdbsum/6yhm PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6yhm ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6yhm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6yhm OCA], [https://pdbe.org/6yhm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6yhm RCSB], [https://www.ebi.ac.uk/pdbsum/6yhm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6yhm ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/A0A0N9JNY6_YERPU A0A0N9JNY6_YERPU]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 22: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Blankenfeldt, W]]
+
[[Category: Yersinia pseudotuberculosis]]
-
[[Category: Gazdag, E M]]
+
[[Category: Blankenfeldt W]]
-
[[Category: Heidler, T V]]
+
[[Category: Gazdag EM]]
-
[[Category: Lukat, P]]
+
[[Category: Heidler TV]]
-
[[Category: Cnf]]
+
[[Category: Lukat P]]
-
[[Category: Cytotoxic necrotizing factor]]
+
-
[[Category: Deamidase]]
+
-
[[Category: Putative adp-ribosyltransferase]]
+
-
[[Category: Rhoa activation]]
+
-
[[Category: Rhoa modification]]
+
-
[[Category: Toxin]]
+

Current revision

Crystal structure of the C-terminal domain of CNFy from Yersinia pseudotuberculosis

PDB ID 6yhm

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools