1z9l

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<StructureSection load='1z9l' size='340' side='right'caption='[[1z9l]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='1z9l' size='340' side='right'caption='[[1z9l]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1z9l]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z9L OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=1Z9L FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1z9l]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z9L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z9L FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1z9o|1z9o]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Vapa, Vap33 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z9l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z9l OCA], [https://pdbe.org/1z9l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z9l RCSB], [https://www.ebi.ac.uk/pdbsum/1z9l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z9l ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=1z9l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z9l OCA], [http://pdbe.org/1z9l PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1z9l RCSB], [http://www.ebi.ac.uk/pdbsum/1z9l PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1z9l ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
 
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[[http://www.uniprot.org/uniprot/VAPA_RAT VAPA_RAT]] May play a role in vesicle trafficking.<ref>PMID:19289470</ref>
 
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z9/1z9l_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z9/1z9l_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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==See Also==
==See Also==
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*[[Vesicle-associated membrane protein|Vesicle-associated membrane protein]]
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*[[Vesicle-associated membrane protein 3D structures|Vesicle-associated membrane protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Buffalo rat]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Brickner, J H]]
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[[Category: Rattus norvegicus]]
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[[Category: Brunger, A T]]
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[[Category: Brickner JH]]
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[[Category: Fenn, T D]]
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[[Category: Brunger AT]]
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[[Category: Kaiser, S E]]
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[[Category: Fenn TD]]
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[[Category: Reilein, A R]]
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[[Category: Kaiser SE]]
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[[Category: Walter, P]]
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[[Category: Reilein AR]]
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[[Category: Cytoplasmic domain]]
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[[Category: Walter P]]
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[[Category: Protein binding]]
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[[Category: Vap-a]]
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Current revision

1.7 Angstrom Crystal Structure of the Rat VAP-A MSP Homology Domain

PDB ID 1z9l

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