Virus coat proteins 3D structures

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Current revision (13:15, 3 September 2025) (edit) (undo)
 
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**[[6eqc]] - havVCP 5 hexon + scFv - Cryo EM<br />
**[[6eqc]] - havVCP 5 hexon + scFv - Cryo EM<br />
**[[4v4u]] - havVCP 5 hexon+penton - Cryo EM<br />
**[[4v4u]] - havVCP 5 hexon+penton - Cryo EM<br />
-
**[[5tx1]] - havVCP 26 - Cryo EM<br />
+
**[[7tau]] - havVCP 26 - Cryo EM<br />
**[[6z7q]] - havVCP 41 penton - Cryo EM<br />
**[[6z7q]] - havVCP 41 penton - Cryo EM<br />
**[[4aqq]] - havVCP B3 penton<br />
**[[4aqq]] - havVCP B3 penton<br />
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**[[6diz]], [[6uh1]], [[6uh6]], [[6hu7]], [[6lqd]] – hevVCP A71 Vp1+Vp2+Vp3+Vp4 - Cryo EM<br />
**[[6diz]], [[6uh1]], [[6uh6]], [[6hu7]], [[6lqd]] – hevVCP A71 Vp1+Vp2+Vp3+Vp4 - Cryo EM<br />
**[[3vbf]], [[3vbh]], [[3vbs]], [[4aed]], [[4n53]] – hevVCP A71 Vp1+Vp2+Vp3+Vp4 <br />
**[[3vbf]], [[3vbh]], [[3vbs]], [[4aed]], [[4n53]] – hevVCP A71 Vp1+Vp2+Vp3+Vp4 <br />
-
**[[4rr3]], [[4rs5]], [[4yvw]] – hevVCP A71 Vp1+Vp3+Vp0 <br />
+
**[[3vbr]], [[3vbu]], [[4gmp]], [[4rqp]], [[4rr3]], [[4rs5]], [[4yvs]], [[4yvw]] – hevVCP A71 Vp1+Vp3+Vp0 <br />
-
**[[3vbr]], [[3vbu]], [[4gmp]], [[4rqp]], [[4yvs]], [[4yvw]] – hevVCP A71 Vp1+Vp3+Vp0 <br />
+
**[[3j22]], [[3j23]], [[3j91]] – hevVCP A71 Vp1+Vp3+Vp0 - Cryo EM<br />
**[[3j22]], [[3j23]], [[3j91]] – hevVCP A71 Vp1+Vp3+Vp0 - Cryo EM<br />
**[[4c0u]], [[4c0y]], [[4c10]], [[5zud]], [[5zuf]], [[6z3p]], [[6z3q]] – hevVCP A71 Vp1+Vp2+Vp3 + antibody - Cryo EM<br />
**[[4c0u]], [[4c0y]], [[4c10]], [[5zud]], [[5zuf]], [[6z3p]], [[6z3q]] – hevVCP A71 Vp1+Vp2+Vp3 + antibody - Cryo EM<br />
Line 152: Line 151:
**[[6aj7]], [[6aj9]], [[6wds]], [[6wdt]] – hevVCP D68 Vp1+Vp2+Vp3 + antibody - Cryo EM<br />
**[[6aj7]], [[6aj9]], [[6wds]], [[6wdt]] – hevVCP D68 Vp1+Vp2+Vp3 + antibody - Cryo EM<br />
**[[1bev]] – bevVCP Vp1+Vp2+Vp3+Vp4 - bovine enterovirus<br />
**[[1bev]] – bevVCP Vp1+Vp2+Vp3+Vp4 - bovine enterovirus<br />
 +
**[[6thd]] – bevVCP – Cryo EM<br />
 +
**[[6thn]] – bevVCP + RNA – Cryo EM<br />
*Virus coat protein of foot and mouth disease virus
*Virus coat protein of foot and mouth disease virus
Line 174: Line 175:
**[[1aum]], [[1a8o]], [[1a43]], [[1baj]], [[2gon]], [[2ont]], [[2x82]], [[3h47]], [[3lry]], [[3mge]], [[3nte]], [[3p05]], [[3p0a]], [[4ipy]], [[4nx4]], [[4xfx]], [[4xfy]], [[4xfz]], [[5hgn]], [[6ec2]] – HivVCP-1 p24 C terminal<br />
**[[1aum]], [[1a8o]], [[1a43]], [[1baj]], [[2gon]], [[2ont]], [[2x82]], [[3h47]], [[3lry]], [[3mge]], [[3nte]], [[3p05]], [[3p0a]], [[4ipy]], [[4nx4]], [[4xfx]], [[4xfy]], [[4xfz]], [[5hgn]], [[6ec2]] – HivVCP-1 p24 C terminal<br />
-
**[[3dik]], [[3j34]], [[3j3q]], [[3j3y]], [[3j4f]], [[4usn]], [[5l93]], [[5mcx]], [[5mcy]], [[5mcz]], [[5md0]], [[5md1]], [[5md3]], [[5md4]], [[5md5]], [[5md6]], [[5md7]], [[5md8]], [[5mda]], [[5mdb]], [[5mdc]], [[5mdd]], [[5mdf]], [[5mdg]], [[5up4]], [[5upw]], [[6skk]], [[6vws]], [[6x63]] – HivVCP-1 p24 - Cryo EM<br />
+
**[[3dik]], [[3j34]], [[3j3q]], [[3j3y]], [[3j4f]], [[4usn]], [[5l93]], [[5mcx]], [[5mcy]], [[5mcz]], [[5md0]], [[5md1]], [[5md3]], [[5md4]], [[5md5]], [[5md6]], [[5md7]], [[5md8]], [[5mda]], [[5mdb]], [[5mdc]], [[5mdd]], [[5mdf]], [[5mdg]], [[5up4]], [[5upw]], [[6skk]], [[6skn]], [[6smu]], [[6vws]], [[6x63]] – HivVCP-1 p24 - Cryo EM<br />
 +
**[[6skm]], [[6slq]], [[6slu]] – HivVCP-1 p24 (mutant) - Cryo EM<br />
**[[5md2]], [[5md9]], [[5mde]] – HivVCP-1 p24 C-terminal+N-terminal- Cryo EM<br />
**[[5md2]], [[5md9]], [[5mde]] – HivVCP-1 p24 C-terminal+N-terminal- Cryo EM<br />
**[[2jo0]], [[2kod]], [[2m8l]], [[2m8n]], [[2m8p]] - HivVCP-1 C terminal – NMR<BR />
**[[2jo0]], [[2kod]], [[2m8l]], [[2m8n]], [[2m8p]] - HivVCP-1 C terminal – NMR<BR />
Line 193: Line 195:
**[[5hgp]], [[6erm]], [[6v2f]] – HivVCP-1 C-terminal + inhibitor<br />
**[[5hgp]], [[6erm]], [[6v2f]] – HivVCP-1 C-terminal + inhibitor<br />
**[[3ds0]], [[3ds1]], [[3ds3]], [[3ds4]], [[4qnb]], [[4u0e]], [[4u0f]], [[6axv]], [[6vkv]] – HivVCP-1 p24 C-terminal (mutant) + inhibitor<br />
**[[3ds0]], [[3ds1]], [[3ds3]], [[3ds4]], [[4qnb]], [[4u0e]], [[4u0f]], [[6axv]], [[6vkv]] – HivVCP-1 p24 C-terminal (mutant) + inhibitor<br />
-
**[[2jpr]], [[2l6e]] – HivVCP-1 p24 C-terminal (mutant) + inhibitor - NMR<br />
+
**[[2jpr]], [[2l6e]], [[6rwg]] – HivVCP-1 p24 C-terminal (mutant) + inhibitor - NMR<br />
**[[2buo]] - HivVCP-1 C terminal + inhibitor of capsid assembly<br />
**[[2buo]] - HivVCP-1 C terminal + inhibitor of capsid assembly<br />
-
**[[4u0c]], [[4u0d]], [[6aya]] - HivVCP-1 C terminal + Nup153<br />
+
**[[4u0c]], [[4u0d]], [[5tsv]], [[5tsx]], [[6aya]] - HivVCP-1 C terminal + Nup153<br />
**[[2xt1]], [[2xv6]], [[2xxm]], [[5o2u]] - HivVCP-1 C terminal + camelid VHH <br />
**[[2xt1]], [[2xv6]], [[2xxm]], [[5o2u]] - HivVCP-1 C terminal + camelid VHH <br />
 +
**[[2xxm]] - HivVCP-1 C terminal + camelid VHH + ICA peptide<br />
**[[1afv]], [[1e6j]], [[3vrl]] – HivVCP-1 C terminal + antibody<br />
**[[1afv]], [[1e6j]], [[3vrl]] – HivVCP-1 C terminal + antibody<br />
**[[2gol]] – HivVCP-1 p24 C terminal + p17<br />
**[[2gol]] – HivVCP-1 p24 C terminal + p17<br />
**[[2x83]] - HivVCP-1 C terminal + TRIMCyp<br />
**[[2x83]] - HivVCP-1 C terminal + TRIMCyp<br />
-
**[[6y9v]], [[6y9w]], [[6y9x]], [[6y9y]], [[6y9z]], [[6zdj]] - HivVCP-1 C-terminal + cyclophilin - Cryo EM<br />
+
**[[5fjb]], [[6y9v]], [[6y9w]], [[6y9x]], [[6y9y]], [[6y9z]], [[6zdj]] - HivVCP-1 C-terminal + cyclophilin - Cryo EM<br />
**[[2buo]] - HivVCP-1 278-343 + inhibitor of capsid assembly<br />
**[[2buo]] - HivVCP-1 278-343 + inhibitor of capsid assembly<br />
**[[3ds0]], [[3ds1]], [[3ds3]], [[3ds4]] - HivVCP-1 C terminal (mutant) + inhibitor of capsid assembly<br />
**[[3ds0]], [[3ds1]], [[3ds3]], [[3ds4]] - HivVCP-1 C terminal (mutant) + inhibitor of capsid assembly<br />
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**[[1m9e]], [[1m9f]], [[1m9x]], [[1m9y]] - HivVCP-1 N-terminal (mutant) + cyclophilin<br />
**[[1m9e]], [[1m9f]], [[1m9x]], [[1m9y]] - HivVCP-1 N-terminal (mutant) + cyclophilin<br />
**[[4lqw]] - HivVCP-1 N terminal + Nup358<br />
**[[4lqw]] - HivVCP-1 N terminal + Nup358<br />
 +
**[[2x2d]] - HivVCP-1 N terminal + CypA<br />
**[[2xde]], [[4inb]], [[4j93]] – HivVCP-1 N-terminal + inhibitor<br />
**[[2xde]], [[4inb]], [[4j93]] – HivVCP-1 N-terminal + inhibitor<br />
-
*Virus coat protein of norovirus
+
*Virus coat protein of norovirus; Domains P 222-530
**[[1ihm]], [[3by1]], [[3by2]], [[3d26]], [[2zl5]], [[2zl6]], [[2zl7]] – NvVCP – Norwalk virus<br />
**[[1ihm]], [[3by1]], [[3by2]], [[3d26]], [[2zl5]], [[2zl6]], [[2zl7]] – NvVCP – Norwalk virus<br />
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*Virus coat protein of papillomavirus
*Virus coat protein of papillomavirus
-
**[[1dzl]] – hpvVCP L1 (mutant) – Human papillomavirus<br />
+
**[[1dzl]] – hppvVCP L1 (mutant) – Human papillomavirus<br />
-
**[[2r5h]], [[2r5i]], [[2r5j]], [[2r5k]], [[5j6r]], [[5w1o]], [[5w1x]], [[5y9e]], [[6igc]], [[6igd]], [[6ige]], [[6igf]] - hpvVCP L1<br />
+
**[[2r5h]], [[2r5i]], [[2r5j]], [[2r5k]], [[5j6r]], [[5w1o]], [[5w1x]], [[5y9e]], [[6igc]], [[6igd]], [[6ige]], [[6igf]] - hppvVCP L1<br />
-
**[[6l31]], [[3j6r]], [[3j7g]], [[5jb1]], [[5kep]], [[5keq]] - hpvVCP L1 - Cryo EM<br />
+
**[[6l31]], [[3j6r]], [[3j7g]], [[5jb1]], [[5kep]], [[5keq]] - hppvVCP L1 - Cryo EM<br />
-
**[[5y9c]], [[5y9f]] - hpvVCP L1 + antibody<br />
+
**[[5y9c]], [[5y9f]] - hppvVCP L1 + antibody<br />
-
**[[3j8v]], [[3j8w]], [[3j8z]], [[3jba]], [[6bsp]], [[6bt3]], [[7cn2]], [[7dnh]], [[7dnk]], [[7dnl]] - hpvVCP L1 + antibody - Cryo EM<br />
+
**[[3j8v]], [[3j8w]], [[3j8z]], [[3jba]], [[6bsp]], [[6bt3]], [[7cn2]], [[7dnh]], [[7dnk]], [[7dnl]] - hppvVCP L1 + antibody - Cryo EM<br />
-
**[[3iyj]] - bpvVCP L1 - bovine papillomavirus - Cryo EM<br />
+
**[[3iyj]] - bppvVCP L1 - bovine papillomavirus - Cryo EM<br />
*Virus coat protein of parvovirus
*Virus coat protein of parvovirus
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**[[1asj]], [[1hxs]], [[1pov]], [[1pvc]] – pvVCP – poliovirus<br />
**[[1asj]], [[1hxs]], [[1pov]], [[1pvc]] – pvVCP – poliovirus<br />
-
**[[1dgi]], [[5o5b]] – pvVCP – Cryo EM<br />
+
**[[1dgi]], [[1xyr]], [[5o5b]] – pvVCP – Cryo EM<br />
**[[1al2]], [[1ar6]], [[1ar7]], [[1ar8]], [[1ar9]] – pvVCP (mutant)<br />
**[[1al2]], [[1ar6]], [[1ar7]], [[1ar8]], [[1ar9]] – pvVCP (mutant)<br />
**[[1po2]], [[1vba]], [[1vbb]], [[1vbc]], [[1vbd]], [[1vbe]], [[2plv]] – pvVCP + inhibitor <br />
**[[1po2]], [[1vba]], [[1vbb]], [[1vbc]], [[1vbd]], [[1vbe]], [[2plv]] – pvVCP + inhibitor <br />
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**[[5z0v]] – zvVCP (mutant) <br />
**[[5z0v]] – zvVCP (mutant) <br />
**[[6lnt]] – zvVCP + envelope protein + pre-membrane protein + antibody – Cryo EM<br />
**[[6lnt]] – zvVCP + envelope protein + pre-membrane protein + antibody – Cryo EM<br />
 +
 +
*Virus coat protein of human rhinovirus
 +
**[[1r1a]] – hrv1AVCP – human rhinovirus 1A<br />
 +
**[[2hwd]] – hrv1AVCP + antiviral agent<br />
 +
**[[1fpn]] – hrv2VCP – human rhinovirus 2<br />
 +
**[[1v9u]], [[3dpr]] – hrv2VCP + VLDL receptor module <br />
 +
**[[1rhi]] – hrv3VCP – human rhinovirus 3<br />
 +
**[[4rhv]] – hrv14VCP – human rhinovirus 14<br />
 +
**[[1rmu]], [[2rmu]] – hrv14VCP (mutant)<br />
 +
**[[1hri]], [[1hrv]], [[1na1]], [[1ncq]], [[1r08]], [[1r09]], [[2hwb]], [[2hwc]], [[2hwe]], [[2hwf]], [[2r04]], [[2r06]], [[2r07]], [[2rm2]], [[2rr1]], [[2rs1]], [[2rs3]], [[2rs5]] – hrv14VCP + antiviral agent<br />
 +
**[[1rvf]] – hrv14VCP + antibody <br />
 +
**[[1d3i]] – hrv14VCP + intercellular adhesion molecule<br />
 +
**[[1nd2]] – hrv16VCP – human rhinovirus 16<br />
 +
**[[1aym]], [[1ayn]] – hrv16VCP (mutant)<br />
 +
**[[1c8m]], [[1ncr]], [[1nd3]], [[1qju]], [[1qjx]], [[1qjy]] – hrv16VCP + antiviral agent<br />
 +
**[[1d3e]] – hrv16VCP + intercellular adhesion molecule<br />
*Virus coat protein of plant viruses
*Virus coat protein of plant viruses
**[[1js9]], [[1yc6]] – bmvVCP – brome mosaic virus<br />
**[[1js9]], [[1yc6]] – bmvVCP – brome mosaic virus<br />
-
**[[3j7l]], [[3j7m]], [[3j7n]], [[6voc]] – bmvVCP – Cryo EM<br />
+
**[[3j7l]], [[3j7m]], [[3j7n]], [[6voc]], [[7pe1]], [[7pe2]] – bmvVCP – Cryo EM<br />
-
**[[1f15]] – cmvVCP – cucumber mosaic virus<br />
+
**[[1f15]], [[4llf]] – cumvVCP – cucumber mosaic virus<br />
-
**[[5ow6]] – cmvVCP – Cryo EM<br />
+
**[[5ow6]] – cumvVCP – Cryo EM<br />
**[[6mrl]] – VCP – cucumber leaf spot virus - Cryo EM<br />
**[[6mrl]] – VCP – cucumber leaf spot virus - Cryo EM<br />
-
**[[1auy]], [[1w39]] – tumvVCP – turnip yellow mosaic virus<br />
+
**[[1auy]], [[1w39]], [[2fz1]] – tumvVCP – turnip yellow mosaic virus<br />
-
**[[6t34]] – tumvVCP – Cryo EM<BR />
+
**[[9q8j]], [[6t34]] – tumvVCP – Cryo EM<BR />
**[[3zxa]] - tcvVCP – turnip crinkle virus<br />
**[[3zxa]] - tcvVCP – turnip crinkle virus<br />
**[[3zx8]], [[3zx9]] – tcvVCP – Cryo EM<BR />
**[[3zx8]], [[3zx9]] – tcvVCP – Cryo EM<BR />
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**[[1f2n]] - VCP – rice yellow mosaic virus<br />
**[[1f2n]] - VCP – rice yellow mosaic virus<br />
**[[1uf2]] – VCP + proteins – rice dwarf virus<br />
**[[1uf2]] – VCP + proteins – rice dwarf virus<br />
-
**[[1a34]], [[2tmv]], [[1ei7]], [[4oq8]], [[4oq9]], [[4nia]] – stmvVCP + RNA - satellite tobacco mosaic virus<br />
+
**[[7epp]] - VCP - alfalfa mosaic virus – Cryo EM<br />
-
**[[3j06]] - stmvVCP + RNA – Cryo EM<BR />
+
-
**[[2om3]], [[2xea]], [[4udv]] – stmvVCP – Cryo EM<BR />
+
-
**[[3kml]] – stmvVCP (mutant) <br />
+
-
**[[2buk]], [[1vtm]], [[4v4m]] - stnvVCP - satellite tobacco necrosis virus<br />
+
-
**[[3s4g]] - stnvVCP + RNA <BR />
+
-
**[[6i5a]], [[6sae]], [[6sag]] – tmvVCP - tobacco mosaic virus - Cryo EM<br />
+
**[[1a6c]] - VCP - tobacco ringspot virus<br />
**[[1a6c]] - VCP - tobacco ringspot virus<br />
**[[4y6t]], [[4y6x]] – VCP – tobacco streak virus<br />
**[[4y6t]], [[4y6x]] – VCP – tobacco streak virus<br />
**[[1e57]], [[1qjz]], [[2wws]] – pmvVCP – Physalis mottle virus<br />
**[[1e57]], [[1qjz]], [[2wws]] – pmvVCP – Physalis mottle virus<br />
-
**[[2xpj]] - pmvVCP + RNA <BR />
 
**[[2izw]] - VCP – ryegrass mottle virus<br />
**[[2izw]] - VCP – ryegrass mottle virus<br />
**[[1opo]] - VCP – carnation mottle virus<br />
**[[1opo]] - VCP – carnation mottle virus<br />
 +
**[[1ng0]] - VCP – cocksfoot mottle virus<br />
**[[3jb8]] – VCP - maize chlorotic mottle virus<br />
**[[3jb8]] – VCP - maize chlorotic mottle virus<br />
**[[2y26]], [[4v5t]], [[4v5w]] – VCP – grapevine fanleaf virus<br />
**[[2y26]], [[4v5t]], [[4v5w]] – VCP – grapevine fanleaf virus<br />
**[[1ny7]], [[1cwp]], [[2bfu]], [[5mfo]] – cmvVCP – cowpea mosaic virus<br />
**[[1ny7]], [[1cwp]], [[2bfu]], [[5mfo]] – cmvVCP – cowpea mosaic virus<br />
-
**[[5ms1]], [[5msh]], [[6qoz]] - cmvVCP - Cryo EM <br />
+
**[[5a33]], [[5ms1]], [[5msh]], [[6qoz]] - cmvVCP - Cryo EM <br />
-
**[[1za7]] - ccmvVCP (mutant) – cowpea chlorotic mottle virus<br />
+
**[[8bi4]], [[8c38]], [[8cpy]] - ccmvVCP – cowpea chlorotic mottle virus – Cryo EM<br />
-
**[[1cwp]] - ccmvVCP + RNA <BR />
+
**[[1za7]] - ccmvVCP (mutant) <br />
-
**[[1pgl]], [[1pgw]], [[1bmv]] – VCP + RNA – bean pod mottle virus<br />
+
**[[6qcc]] – VCP – broad bean stain virus – Cryo EM<br />
**[[6qcc]] – VCP – broad bean stain virus – Cryo EM<br />
**[[2tbv]] – VCP – tomato bushy stunt virus<br />
**[[2tbv]] – VCP – tomato bushy stunt virus<br />
-
**[[1laj]] – VCP + RNA – tomato aspermy virus<br />
 
**[[1smv]], [[1vak]], [[1vb2]], [[1vb4]], [[1x33]], [[1x35]], [[1x36]], [[2vq0]] – smvVCP – sesbania mosaic virus<br />
**[[1smv]], [[1vak]], [[1vb2]], [[1vb4]], [[1x33]], [[1x35]], [[1x36]], [[2vq0]] – smvVCP – sesbania mosaic virus<br />
**[[2wlp]] - smvVCP (mutant)<BR />
**[[2wlp]] - smvVCP (mutant)<BR />
**[[1stm]], [[4v99]], [[5cvz]], [[5cw0]] – spmvVCP - satellite panicum mosaic virus<br />
**[[1stm]], [[4v99]], [[5cvz]], [[5cw0]] – spmvVCP - satellite panicum mosaic virus<br />
-
**[[4v99]] - spmvVCP + RNA <BR />
 
**[[4sbv]] – VCP – southern bean mosaic virus<br />
**[[4sbv]] – VCP – southern bean mosaic virus<br />
**[[6mrm]] – VCP - red clover necrotic mosaic virus - Cryo EM<br />
**[[6mrm]] – VCP - red clover necrotic mosaic virus - Cryo EM<br />
 +
**[[2zah]] – VCP – melon necrotic spot virus <br />
**[[6f2s]] – VCP - ageratum yellow vein virus - Cryo EM<br />
**[[6f2s]] – VCP - ageratum yellow vein virus - Cryo EM<br />
**[[6ek5]] – VCP - African cassava mosaic virus - Cryo EM<br />
**[[6ek5]] – VCP - African cassava mosaic virus - Cryo EM<br />
**[[1m1c]] – VCP – yeast L-A virus<br />
**[[1m1c]] – VCP – yeast L-A virus<br />
 +
**[[7qwx]], [[7qwz]] – VCP – yeast L-BCL virus – Cryo EM<br />
 +
**[[3j3i]] – VCP – Penicillium chrysogenum virus – Cryo EM<BR />
**[[3iym]] – VCP – Penicillium stoloniferum virus – Cryo EM<BR />
**[[3iym]] – VCP – Penicillium stoloniferum virus – Cryo EM<BR />
-
**[[6hxx]] – pvVCP – potato virus – Cryo EM<BR />
+
**[[6sco]] – plrvVCP – potato leaf roll virus – Cryo EM<BR />
-
**[[6r7g]] – pvVCP + RNA – Cryo EM<br />
+
**[[7rlm]] – plrvVCP <br />
-
**[[6sco]] – VCP – potato leaf roll virus – Cryo EM<BR />
+
**[[6hxx]], [[8opa]], [[8opb]], [[8opf]], [[8opg]], [[8oph]] – pvyVCP – potato virus Y – Cryo EM<BR />
 +
**[[8opd]], [[8opj]], [[8opq]] – pvyVCP (mutant) – Cryo EM<BR />
**[[5fn1]] – VCP – pepino mosaic virus – Cryo EM<br />
**[[5fn1]] – VCP – pepino mosaic virus – Cryo EM<br />
 +
**[[4dox]] – VCP – papaya mosaic virus <br />
 +
**[[7ncr]] – VCP – pepper cryptic virus – Cryo EM<br />
 +
 +
*Virus coat protein of plant virus complex with RNA
 +
 +
**[[2xpj]] - pmvVCP + RNA <BR />
 +
**[[5a32]] - cmvVCP + RNA <BR />
 +
**[[1cwp]] - ccmvVCP + RNA <BR />
 +
**[[1pgl]], [[1pgw]], [[1bmv]] – VCP + RNA – bean pod mottle virus<br />
 +
**[[1laj]] – VCP + RNA – tomato aspermy virus<br />
 +
**[[6r7g]] – pvxVCP + RNA – potato virus X - Cryo EM<br />
 +
**[[8opc]], [[8ope]] – pvyVCP + RNA – Cryo EM<br />
 +
**[[8opl]] – pvyVCP (mutant) + RNA – Cryo EM<br />
 +
**[[5odv]] – VCP + RNA – watermelon mosaic virus - Cryo EM<br />
 +
**[[7og6]] – VCP + RNA – Alternanthera mosaic virus - Cryo EM<br />
 +
**[[8ugq]] – VCP + DNA – maize streak virus - Cryo EM<br />
 +
**[[2fz2]] - tumvVCP + RNA <BR />
 +
 +
*For coat protein of satellite tobacco necrosis virus see [[Tobacco Mosaic Virus]]
 +
 +
*Virus coat protein of equine encephalitis virus
 +
 +
**[[1ep5]], [[1ep6]] – VeevVCP C terminal – Venezuelan equine encephalitis virus<br />
 +
**[[6mx4]], [[6mx7]], [[6odf]], [[7ffe]], [[7ffq]] – VeevVCP – Cryo EM<br />
 +
**[[3j0c]], [[3j0g]] - VeevVCP C terminal + envelope glycoprotein – Cryo EM<BR />
 +
**[[7fff]] - VeevVCP + envelope glycoprotein + LDLR – Cryo EM<BR />
 +
**[[7ffn]] - VeevVCP + envelope glycoprotein + p130 + LDLR – Cryo EM<BR />
 +
**[[7sfu]] - VeevVCP + envelope glycoproteins – Cryo EM<BR />
 +
**[[7fsv]], [[7sfw]] - VeevVCP + envelope glycoproteins + antibody – Cryo EM<BR />
 +
**[[7ffl]], [[7ffo]] - VeevVCP + envelope glycoproteins + assembly protein – Cryo EM<BR />
 +
**[[3ve6]] – VeevVCP NLS + importin<br />
 +
**[[6mui]], [[6mw9]], [[6mwc]], [[6mwv]], [[6mwx]], [[8eeu]], [[8eev]] – VeevVCP + antibody – Cryo EM<br />
 +
**[[8dec]], [[8dee]] – WeevVCP + envelope glycoproteins – Western equine encephalitis virus - Cryo EM<br />
*Virus coat protein by fiber diffraction
*Virus coat protein by fiber diffraction
Line 445: Line 493:
**[[1cgm]] – VCP – cucumber green mottle virus<br />
**[[1cgm]] – VCP – cucumber green mottle virus<br />
**[[1rmv]] - VCP + RNA – fibgrass mosaic virus<br />
**[[1rmv]] - VCP + RNA – fibgrass mosaic virus<br />
-
**[[1pfi]], [[2ifm]] – VCP – Pf1 virus<br />
+
**[[3pdm]] – VCP – hibiscus latent Singapore virus<br />
-
**[[1vtm]] - stmvVCP <br />
+
**[[1hgv]], [[1hgz]], [[1hh0]] – VCP – Thermus phage PH75<br />
 +
**[[2c0w]] – Fd1VCP – Enterobacteria phage fd<br />
 +
**[[2hi5]] – Fd1VCP – Cryo EM<br />
 +
**[[1ql1]] – prvVCP – Primolicivirus<br />
 +
**[[2klv]] – prvVCP – NMR<br />
*Virus coat protein of other viruses
*Virus coat protein of other viruses
Line 456: Line 508:
**[[1nov]] – VCP – Nodamura virus<br />
**[[1nov]] – VCP – Nodamura virus<br />
**[[4zpy]] – mvVCP Vp1 (mutant) - minute virus <br />
**[[4zpy]] – mvVCP Vp1 (mutant) - minute virus <br />
-
**[[1mvm]], [[1z1c]] – mvVCP VP2 + DNA <br />
 
**[[1z14]] – mvVCP Vp2<br />
**[[1z14]] – mvVCP Vp2<br />
**[[2xgk]] – mvVCP Vp2 (mutant) <br />
**[[2xgk]] – mvVCP Vp2 (mutant) <br />
-
**[[2bbv]] – VCP + RNA – black beetle virus<br />
+
**[[7z5d]] – mvVCP Vp2 – Cryo EM<br />
 +
**[[7z5e]], [[7z5f]] – mvVCP Vp2 (mutant) – Cryo EM<br />
**[[2kgf]] – mpmvVCP p27 N-terminal – Mason-Pfizer monkey virus - NMR<br />
**[[2kgf]] – mpmvVCP p27 N-terminal – Mason-Pfizer monkey virus - NMR<br />
**[[4ard]], [[4arg]] – mpmvVCP p27 – Cryo EM<BR />
**[[4ard]], [[4arg]] – mpmvVCP p27 – Cryo EM<BR />
**[[1vcp]], [[1vcq]] – sfvVCP – semliki forest virus<br />
**[[1vcp]], [[1vcq]] – sfvVCP – semliki forest virus<br />
**[[1dyl]] – sfvVCP – Cryo EM<br />
**[[1dyl]] – sfvVCP – Cryo EM<br />
-
**[[2yew]] - VCP + envelope glycoprotein – Barmah forest virus - Cryo EM<BR />
 
**[[1dnv]] – VCP – Galleria mellonella densovirus<br />
**[[1dnv]] – VCP – Galleria mellonella densovirus<br />
**[[2eia]], [[1eia]] – VCP p26 – equine infectious anemia virus<br />
**[[2eia]], [[1eia]] – VCP p26 – equine infectious anemia virus<br />
-
**[[1ep5]], [[1ep6]] – eevVCP C terminal – equine encephalitis virus<br />
 
-
**[[3j0c]], [[3j0g]] - eevVCP C terminal + envelope glycoprotein – Cryo EM<BR />
 
-
**[[3ve6]] – eevVCP NLS + importin<br />
 
-
**[[6mx4]], [[6mx7]], [[6odf]] – eevVCP – Cryo EM<br />
 
-
**[[6mui]], [[6mw9]], [[6mwc]], [[6mwv]], [[6mwx]] – eevVCP + antibody – Cryo EM<br />
 
-
**[[1f8v]] – VCP + RNA – pariacoto virus<br />
 
**[[2r18]], [[2z7j]] – VCP Vp3 – birnavirus<br />
**[[2r18]], [[2z7j]] – VCP Vp3 – birnavirus<br />
**[[2vf1]] – VCP – rabbit picobirnavirus<br />
**[[2vf1]] – VCP – rabbit picobirnavirus<br />
Line 484: Line 529:
**[[1wcd]], [[1wce]], [[2df7]], [[3fbm]], [[3ide]] – ibdvVCP Vp2 – infectious bursal disease virus<br />
**[[1wcd]], [[1wce]], [[2df7]], [[3fbm]], [[3ide]] – ibdvVCP Vp2 – infectious bursal disease virus<br />
**[[2r18]], [[2z7j]] – ibdvVCP Vp3<br />
**[[2r18]], [[2z7j]] – ibdvVCP Vp3<br />
-
**[[2qqp]] – VCP + RNA – Providence virus<br />
 
**[[4rft]], [[4rfu]], [[4wiz]] - VCP – grouper nervous necrosis virus<br />
**[[4rft]], [[4rfu]], [[4wiz]] - VCP – grouper nervous necrosis virus<br />
**[[6itb]], [[6itf]] – fhvVCP β - flock house virus - Cryo EM<br />
**[[6itb]], [[6itf]] – fhvVCP β - flock house virus - Cryo EM<br />
-
**[[4fsj]], [[4ftb]] - fhvVCP β+γ + RNA<br />
 
-
**[[3lob]] – fhvVCP (mutant) + RNA<br />
 
-
**[[4fte]], [[4fts]] – fhvVCP α (mutant) + RNA<br />
 
**[[3nap]], [[lzo]] – VCP – triatoma virus<br />
**[[3nap]], [[lzo]] – VCP – triatoma virus<br />
**[[2xgu]], [[2xgv]] – relvVCP N terminal – rabbit endogenous lentivirus<br />
**[[2xgu]], [[2xgv]] – relvVCP N terminal – rabbit endogenous lentivirus<br />
-
**[[2xgy]] – relvVCP N terminal + cyclophilin<br />
 
**[[3j1p]], [[3zue]] – rhdvVCP Vp60 - rabbit hemorrhagic disease virus – Cryo EM<BR />
**[[3j1p]], [[3zue]] – rhdvVCP Vp60 - rabbit hemorrhagic disease virus – Cryo EM<BR />
**[[4egt]], [[4ejr]], [[4x1w]], [[4x1x]], [[4x1z]] – rhdvVCP Vp60<BR />
**[[4egt]], [[4ejr]], [[4x1w]], [[4x1x]], [[4x1z]] – rhdvVCP Vp60<BR />
**[[3r0r]], [[5zju]] – pcvVCP 2 – pig circovirus<br />
**[[3r0r]], [[5zju]] – pcvVCP 2 – pig circovirus<br />
**[[3jci]], [[5zbo]], [[6e2r]], [[6e2x]], [[6e2z]], [[6e30]], [[6e32]], [[6e34]], [[6e39]], [[6lm3]] – pcvVCP 2 – Cryo EM<br />
**[[3jci]], [[5zbo]], [[6e2r]], [[6e2x]], [[6e2z]], [[6e30]], [[6e32]], [[6e34]], [[6e39]], [[6lm3]] – pcvVCP 2 – Cryo EM<br />
-
**[[6ola]] – pcvVCP 2 + DNA – Cryo EM<br />
 
-
**[[6l62]] – pcvVCP 2 + antibody – Cryo EM<br />
 
**[[6rpk]], [[6rpl]], [[6rpo]] – bcvVCP – bat circovirus - Cryo EM<br />
**[[6rpk]], [[6rpl]], [[6rpo]] – bcvVCP – bat circovirus - Cryo EM<br />
-
**[[1mqt]], [[1oot]] – VCP – swine vesicular disease virus<br />
+
**[[1mqt]], [[1oop]] – VCP – swine vesicular disease virus<br />
**[[3s6p]] – VCP – Helicoverpa armigera stunt virus<br />
**[[3s6p]] – VCP – Helicoverpa armigera stunt virus<br />
**[[3m8l]] – FcvVCP – feline calicivirus<br />
**[[3m8l]] – FcvVCP – feline calicivirus<br />
**[[4pb6]] – FcvVCP Vp1 <br />
**[[4pb6]] – FcvVCP Vp1 <br />
**[[6gsh]] – FcvVCP Vp1 – Cryo EM<br />
**[[6gsh]] – FcvVCP Vp1 – Cryo EM<br />
-
**[[6gsi]] – FcvVCP Vp1+Vp2 + junctional adhesion molecule – Cryo EM<br />
+
**[[7bjp]] – VCP – calicivirus – Cryo EM<br />
**[[6ojn]] – VCP - singapore grouper iridovirus - Cryo EM<br />
**[[6ojn]] – VCP - singapore grouper iridovirus - Cryo EM<br />
**[[6rj0]] – VCP – Atlantic cod nervous necrosis virus – Cryo EM<br />
**[[6rj0]] – VCP – Atlantic cod nervous necrosis virus – Cryo EM<br />
**[[6rj0]] – osgnnvVCP – orange-spotted grouper nervous necrosis virus – Cryo EM<br />
**[[6rj0]] – osgnnvVCP – orange-spotted grouper nervous necrosis virus – Cryo EM<br />
**[[4rft]], [[4rfu]], [[4wiz]] – osgnnvVCP <br />
**[[4rft]], [[4rfu]], [[4wiz]] – osgnnvVCP <br />
-
**[[3j9x]] – VCP – Sulfolobus islandicus rod-shaped virus <br />
+
**[[3f2e]], [[3j9x]] – VCP – Sulfolobus islandicus rod-shaped virus <br />
 +
**[[8a5t]] – VCP – L-A virus - Cryo EM<br />
 +
**[[6yfd]], [[6yff]], [[6yfg]] – VCP – Beihai levi-like virus <br />
 +
**[[6yft]], [[6yfu]] – VCP – Wenzhou levi-like virus <br />
 +
**[[2bbd]] - stivVCP – Sulfolobus turreted icosahedral virus <BR />
 +
*Virus coat protein of other viruses’ complexes
 +
**[[1mvm]], [[1z1c]] – mvVCP VP2 + DNA <br />
 +
**[[2bbv]] – VCP + RNA – black beetle virus<br />
 +
**[[2yew]] - VCP + envelope glycoprotein – Barmah forest virus - Cryo EM<BR />
 +
**[[1f8v]] – VCP + RNA – pariacoto virus<br />
 +
**[[2qqp]] – VCP + RNA – Providence virus<br />
 +
**[[4fsj]], [[4ftb]] - fhvVCP β+γ + RNA<br />
 +
**[[3lob]] – fhvVCP (mutant) + RNA<br />
 +
**[[4fte]], [[4fts]] – fhvVCP α (mutant) + RNA<br />
 +
**[[2xgy]] – relvVCP N terminal + cyclophilin<br />
 +
**[[6ola]] – pcvVCP 2 + DNA – Cryo EM<br />
 +
**[[6l62]] – pcvVCP 2 + antibody – Cryo EM<br />
 +
**[[6gsi]] – FcvVCP Vp1+Vp2 + junctional adhesion molecule – Cryo EM<br />
 +
**[[7wco]] - VCP + envelope glycoproteins – Cryo EM<BR />
 +
**[[3j31]] - stivVCP + A223 penton base + A55 membrane protein + C381 turret protein – Sulfolobus turreted icosahedral virus – Cryo EM<BR />
 +
 
 +
*Phage coat protein
 +
 
 +
**[[1cjd]], [[1hqn]], [[1hx6]] – PCP – Enterobacteria phage PRD1<br />
 +
**[[1fdm]], [[3knq]] – Fd1PCP <br />
 +
**[[8ch5]] – Fd1PCP – Cryo EM<br />
 +
**[[1nh4]] – Fd1PCP – NMR<br />
 +
**[[8b3o]], [[8b3p]], [[8b3q]] – PCP – Enterobacteria phage f1 – Cryo EM<br />
 +
**[[1fr5]] – PCP – Enterobacteria phage fr <br />
 +
**[[1una]] – PCP – Enterobacteria phage ga <br />
 +
**[[2xyy]], [[3iyh]] – PCP – Enterobacteria phage p22 – Cryo EM<br />
 +
**[[8ixj]], [[8ixk]], [[8ixl]], [[8jwt]], [[8jww]], [[8jwx]] – M13PCP – Bacteriophage M13 – Cryo EM<br />
 +
**[[2cpb]], [[2cps]], [[2mjz]] – M13PCP – NMR<br />
 +
**[[6yf9]], [[6yfa]], [[6yfb]], [[6yfc]], [[6yfe]], [[6yfh]], [[6yfl]], [[6yfj]], [[6yfk]], [[6yfm]], [[6yfn]], [[6yfo]], [[6yfp]], [[6yfq]], [[6yfr]], [[6yfs]] – PCP – Leviviridae<br />
 +
**[[1msc]], [[1zdk]], [[2ms2]], [[2wbh]] – MS2PCP – ''Escherichia'' phage MS2<br />
 +
**[[4bp7]], [[6rrs]], [[6rrt]] – MS2PCP – Cryo EM<br />
 +
**[[4zor]] – MS2PCP (mutant) <br />
 +
**[[1aq3]], [[1u1y]], [[1zdh]], [[1zdi]], [[1zdj]], [[2bu1]], [[2c4q]], [[2c4z]], [[2c50]], [[2c51]], [[2iz8]], [[2iz9]], [[2izn]], [[2vtu]], [[6msf]] – MS2PCP + RNA <br />
 +
**[[1aq4]], [[1zse]], [[2b2d]], [[2b2e]], [[2b2g]], [[2bny]], [[2bq5]], [[2bs0]], [[2bs1]] – MS2PCP (mutant) + RNA <br />
 +
**[[5tc1]] – MS2PCP + maturation protein + RNA – Cryo EM<br />
 +
**[[5kip]], [[5vly]], [[5vlz]], [[7lge]], [[7lgf]], [[7lgg]], [[7lgh]], [[7lhd]], [[8feh]] – bqbPCP - Bacteriophage Qbeta – Cryo EM<br />
 +
**[[4l8h]] – bqbPCP + RNA<br />
 +
**[[1zn5]] – pppf1VCP - NMR<br />
 +
**[[6a7f]] – PCP – Filamentous phage – Cryo EM<br />
 +
**[[1dwn]], [[1pfi]], [[1ql2]], [[2ifm]], [[2qud]], [[2vf9]] – pmpVCP – ''Pseudomonas'' phage <br />
 +
**[[6n4v]] – pmpVCP – Cryo EM<br />
 +
**[[8tux]] – pmpVCP + RNA – Cryo EM<br />
 +
**[[2qux]], [[4ang]] – pmpVCP + RNA <br />
 +
**[[4an5]] – PCP – Bacillus phage spp1 – Cryo EM<br />
 +
**[[2m5s]], [[6mpo]] – lvPCP I domain – Lederbergvirus – NMR<br />
 +
**[[2xyz]], [[3iyi]] – lvPCP – Cryo EM<br />
 +
**[[5jzr]] – acpVCP – ''Acinetobacter'' phage - NMR<br />
 +
**[[5fs4]] – acpVCP <br />
 +
**[[5lqp]], [[8toc]], [[8tw2]], [[8twc]] – acpVCP – Cryo EM<br />
 +
**[[1pjf]] – prvVCP – NMR<br />
 +
**[[6tuq]] – prvVCP – Cryo EM<br />
 +
**[[6tup]] – prvVCP + DNA – Cryo EM<br />
 +
**[[6yf7]] – VCP – Marine phage AC <br />
 +
**[[4eo0]] – VCP pilus binding domain – ''Salmonella'' phage IKe <br />
}}
}}
[[Category:Topic Page]]
[[Category:Topic Page]]

Current revision

3D structures of virus coat proteins

Updated on 03-September-2025 - For a general description of the protein see Virus coat protein

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Jaime Prilusky

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