7bfs
From Proteopedia
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==deoxyxylose nucleic acid hairpin== | ==deoxyxylose nucleic acid hairpin== | ||
| - | <StructureSection load='7bfs' size='340' side='right'caption='[[7bfs]]' scene=''> | + | <StructureSection load='7bfs' size='340' side='right'caption='[[7bfs]], [[NMR_Ensembles_of_Models | 10 NMR models]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full | + | <table><tr><td colspan='2'>[[7bfs]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7BFS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7BFS FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bfs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bfs OCA], [https://pdbe.org/7bfs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bfs RCSB], [https://www.ebi.ac.uk/pdbsum/7bfs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bfs ProSAT]</span></td></tr> | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=XC:(3R)-8-CYCLOPROPYL-6-(MORPHOLIN-4-YLMETHYL)-7-(1-NAPHTHYLMETHYL)-5-OXO-2,3-DIHYDRO-5H-[1,3]THIAZOLO[3,2-A]PYRIDINE-3-CARBOXYLIC+ACID'>XC</scene></td></tr> |
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7bfs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7bfs OCA], [https://pdbe.org/7bfs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7bfs RCSB], [https://www.ebi.ac.uk/pdbsum/7bfs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7bfs ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Xenobiology explores synthetic nucleic acid polymers as alternative carriers of genetic information to expand the central dogma. The xylo- and deoxyxylo-nucleic acids (XyNA and dXyNA), containing 3' epimers of riboses and deoxyriboses, are considered as potential candidates for an orthogonal system. In this study, thermal and spectroscopic analysis show that XyNA and dXyNA form stable hairpins. The dXyNA hairpin structure determined by NMR spectroscopy contains a flexible loop that locks the stem in a stable ladder-like duplex with marginal right-handed helicity. Reduced flexibility of the dXyNA duplex observed in the stem of the hairpin demonstrates that folding of dXyNA yields more stable structures as described so far. | ||
| + | |||
| + | Stable hairpin structures formed by xylose based nucleic acids.,Mattelaer CA, Maiti M, Smets L, Maiti M, Schepers G, Mattelaer HP, Rosemeyer H, Herdewijn P, Lescrinier E Chembiochem. 2021 Jan 11. doi: 10.1002/cbic.202000803. PMID:33427360<ref>PMID:33427360</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 7bfs" style="background-color:#fffaf0;"></div> | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Herdewijn P]] | + | [[Category: Herdewijn, P]] |
| - | [[Category: Lescrinier E]] | + | [[Category: Lescrinier, E]] |
| - | [[Category: Maiti M]] | + | [[Category: Maiti, M]] |
| - | [[Category: Mattelaer C | + | [[Category: Mattelaer, C A]] |
| - | [[Category: Mattelaer H | + | [[Category: Mattelaer, H P]] |
| - | [[Category: Mohitosh M]] | + | [[Category: Mohitosh, M]] |
| - | [[Category: Rosemeyer H]] | + | [[Category: Rosemeyer, H]] |
| - | [[Category: Schepers G]] | + | [[Category: Schepers, G]] |
| - | [[Category: Smets L]] | + | [[Category: Smets, L]] |
| + | [[Category: Chimeric]] | ||
| + | [[Category: Deoxyxylose nucleic acid]] | ||
| + | [[Category: Dna]] | ||
Current revision
deoxyxylose nucleic acid hairpin
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