2aqr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:00, 6 November 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='2aqr' size='340' side='right'caption='[[2aqr]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
<StructureSection load='2aqr' size='340' side='right'caption='[[2aqr]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2aqr]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/"diplokokkus_intracellularis_meningitidis"_(sic)_weichselbaum_1887 "diplokokkus intracellularis meningitidis" (sic) weichselbaum 1887]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AQR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2aqr]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AQR FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2aqm|2aqm]], [[2aqn|2aqn]], [[2aqp|2aqp]], [[2aqq|2aqq]], [[2aqs|2aqs]], [[2aqt|2aqt]]</div></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sodC ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=487 "Diplokokkus intracellularis meningitidis" (sic) Weichselbaum 1887])</td></tr>
+
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2aqr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aqr OCA], [https://pdbe.org/2aqr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2aqr RCSB], [https://www.ebi.ac.uk/pdbsum/2aqr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2aqr ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2aqr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aqr OCA], [https://pdbe.org/2aqr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2aqr RCSB], [https://www.ebi.ac.uk/pdbsum/2aqr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2aqr ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/SODC_NEIMB SODC_NEIMB]] Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity).
+
[https://www.uniprot.org/uniprot/SODC_NEIMB SODC_NEIMB] Destroys radicals which are normally produced within the cells and which are toxic to biological systems (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 17: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/2aqr_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/2aqr_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 28: Line 26:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Superoxide dismutase]]
+
[[Category: Neisseria meningitidis]]
-
[[Category: Bruns, C K]]
+
[[Category: Bruns CK]]
-
[[Category: Cabelli, D E]]
+
[[Category: Cabelli DE]]
-
[[Category: Cao, Z]]
+
[[Category: Cao Z]]
-
[[Category: DiDonato, M]]
+
[[Category: DiDonato M]]
-
[[Category: Getzoff, E D]]
+
[[Category: Getzoff ED]]
-
[[Category: Kassmann, C J]]
+
[[Category: Kassmann CJ]]
-
[[Category: Kroll, J S]]
+
[[Category: Kroll JS]]
-
[[Category: Tabatabai, L B]]
+
[[Category: Tabatabai LB]]
-
[[Category: Cu/zn superoxide dismutase]]
+
-
[[Category: Electrostatic guidance]]
+
-
[[Category: Neisseria meningitidi]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

CU/ZN superoxide dismutase from neisseria meningitidis K91Q mutant

PDB ID 2aqr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools