1dpn

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[[Image:1dpn.gif|left|200px]]
 
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==B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE==
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The line below this paragraph, containing "STRUCTURE_1dpn", creates the "Structure Box" on the page.
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<StructureSection load='1dpn' size='340' side='right'caption='[[1dpn]], [[Resolution|resolution]] 0.95&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1dpn]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DPN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DPN FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.95&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=TAF:2-DEOXY-2-FLUORO-ARABINO-FURANOSYL+THYMINE-5-PHOSPHATE'>TAF</scene></td></tr>
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{{STRUCTURE_1dpn| PDB=1dpn | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dpn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dpn OCA], [https://pdbe.org/1dpn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dpn RCSB], [https://www.ebi.ac.uk/pdbsum/1dpn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dpn ProSAT]</span></td></tr>
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</table>
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'''B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE'''
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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==Overview==
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[[Category: An H]]
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We have determined single crystal structures of an A-DNA decamer and a B-DNA dodecamer at 0.83 and 0.95 A, respectively. The resolution of the former is the highest reported thus far for any right-handed nucleic acid duplex and the quality of the diffraction data allowed determination of the structure with direct methods. The structures reveal unprecedented details of DNA fine structure and hydration; in particular, we have reexamined the overall hydration of A- and B-form DNA, the distribution of water around phosphate groups, and features of the water structure that may underlie the B to A transition.
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[[Category: Dan Cook P]]
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[[Category: Egli M]]
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==About this Structure==
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[[Category: Joachimiak A]]
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DPN OCA].
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[[Category: Maier MA]]
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[[Category: Manoharan M]]
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==Reference==
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[[Category: Miller R]]
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X-ray crystallographic analysis of the hydration of A- and B-form DNA at atomic resolution., Egli M, Tereshko V, Teplova M, Minasov G, Joachimiak A, Sanishvili R, Weeks CM, Miller R, Maier MA, An H, Dan Cook P, Manoharan M, Biopolymers. 1998;48(4):234-52. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10699842 10699842]
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[[Category: Minasov G]]
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[[Category: An, H.]]
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[[Category: Sanishvili R]]
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[[Category: Cook, P Dan.]]
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[[Category: Teplova M]]
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[[Category: Egli, M.]]
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[[Category: Tereshko V]]
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[[Category: Joachimiak, A.]]
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[[Category: Weeks CM]]
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[[Category: Maier, M A.]]
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[[Category: Manoharan, M.]]
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[[Category: Miller, R.]]
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[[Category: Minasov, G.]]
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[[Category: Sanishvili, R.]]
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[[Category: Teplova, M.]]
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[[Category: Tereshko, V.]]
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[[Category: Weeks, C M.]]
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[[Category: 0 95 a resolution structure]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 14:07:26 2008''
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Current revision

B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE

PDB ID 1dpn

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