6xab
From Proteopedia
(Difference between revisions)
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==Structure of the acetate-bound form of ArrX from Chrysiogenes arsenatis== | ==Structure of the acetate-bound form of ArrX from Chrysiogenes arsenatis== | ||
- | <StructureSection load='6xab' size='340' side='right'caption='[[6xab]]' scene=''> | + | <StructureSection load='6xab' size='340' side='right'caption='[[6xab]], [[Resolution|resolution]] 1.78Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XAB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XAB FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6xab]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Chrysiogenes_arsenatis Chrysiogenes arsenatis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XAB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XAB FirstGlance]. <br> |
- | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xab FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xab OCA], [https://pdbe.org/6xab PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xab RCSB], [https://www.ebi.ac.uk/pdbsum/6xab PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xab ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.781Å</td></tr> |
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xab FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xab OCA], [https://pdbe.org/6xab PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xab RCSB], [https://www.ebi.ac.uk/pdbsum/6xab PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xab ProSAT]</span></td></tr> | ||
</table> | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The anaerobic bacterium Chrysiogenes arsenatis respires using the oxyanion arsenate (AsO4(3-)) as the terminal electron acceptor, where it is reduced to arsenite (AsO3(3-)) while concomitantly oxidizing various organic (e.g., acetate) electron donors. This respiratory activity is catalyzed in the periplasm of the bacterium by the enzyme arsenate reductase (Arr), with expression of the enzyme controlled by a sensor histidine kinase (ArrS) and a periplasmic-binding protein (PBP), ArrX. Here, we report for the first time, the molecular structure of ArrX in the absence and presence of bound ligand arsenate. Comparison of the ligand-bound structure of ArrX with other PBPs shows a high level of conservation of critical residues for ligand binding by these proteins; however, this suite of PBPs shows different structural alterations upon ligand binding. For ArrX and its homologue AioX (from Rhizobium sp. str. NT-26), which specifically binds arsenite, the structures of the substrate-binding sites in the vicinity of a conserved and critical cysteine residue contribute to the discrimination of binding for these chemically similar ligands. | ||
+ | |||
+ | Structural and Functional Investigation of the Periplasmic Arsenate-Binding Protein ArrX from Chrysiogenes arsenatis.,Poddar N, Badilla C, Maghool S, Osborne TH, Santini JM, Maher MJ Biochemistry. 2021 Feb 16;60(6):465-476. doi: 10.1021/acs.biochem.0c00555. Epub, 2021 Feb 4. PMID:33538578<ref>PMID:33538578</ref> | ||
+ | |||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
+ | <div class="pdbe-citations 6xab" style="background-color:#fffaf0;"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
+ | [[Category: Chrysiogenes arsenatis]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: Maher MJ]] | [[Category: Maher MJ]] | ||
[[Category: Poddar N]] | [[Category: Poddar N]] |
Current revision
Structure of the acetate-bound form of ArrX from Chrysiogenes arsenatis
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