6ypq
From Proteopedia
(Difference between revisions)
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| - | ==== | + | ==Crystal structure of native Phycocyanin from T. elongatus in spacegroup R32 at 1.29 Angstroms== |
| - | <StructureSection load='6ypq' size='340' side='right'caption='[[6ypq]]' scene=''> | + | <StructureSection load='6ypq' size='340' side='right'caption='[[6ypq]], [[Resolution|resolution]] 1.29Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id= OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol= FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6ypq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermosynechococcus_vestitus_BP-1 Thermosynechococcus vestitus BP-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6YPQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6YPQ FirstGlance]. <br> |
| - | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ypq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ypq OCA], [https://pdbe.org/6ypq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ypq RCSB], [https://www.ebi.ac.uk/pdbsum/6ypq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ypq ProSAT]</span></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.29Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CYC:PHYCOCYANOBILIN'>CYC</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=MEN:N-METHYL+ASPARAGINE'>MEN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ypq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ypq OCA], [https://pdbe.org/6ypq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ypq RCSB], [https://www.ebi.ac.uk/pdbsum/6ypq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ypq ProSAT]</span></td></tr> | ||
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PHCA_THEVB PHCA_THEVB] Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex (phycobilisome, PBS). Phycocyanin is the major phycobiliprotein in the PBS rod. | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The unique crystallization properties of the antenna protein C-phycocyanin (C-PC) from the thermophilic cyanobacterium Thermosynechococcus elongatus are reported and discussed. C-PC crystallizes in hundreds of significantly different conditions within a broad pH range and in the presence of a wide variety of precipitants and additives. Remarkably, the crystal dimensions vary from a few micrometres, as used in serial crystallography, to several hundred micrometres, with a very diverse crystal morphology. More than 100 unique single-crystal X-ray diffraction data sets were collected from randomly selected crystals and analysed. The addition of small-molecule additives revealed three new crystal packings of C-PC, which are discussed in detail. The high propensity of this protein to crystallize, combined with its natural blue colour and its fluorescence characteristics, make it an excellent candidate as a superior and highly adaptable model system in crystallography. C-PC can be used in technical and methods development approaches for X-ray and neutron diffraction techniques, and as a system for comprehending the fundamental principles of protein crystallography. | ||
| + | |||
| + | C-phycocyanin as a highly attractive model system in protein crystallography: unique crystallization properties and packing-diversity screening.,Sarrou I, Feiler CG, Falke S, Peard N, Yefanov O, Chapman H Acta Crystallogr D Struct Biol. 2021 Feb 1;77(Pt 2):224-236. doi: , 10.1107/S2059798320016071. Epub 2021 Jan 26. PMID:33559611<ref>PMID:33559611</ref> | ||
| + | |||
| + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
| + | </div> | ||
| + | <div class="pdbe-citations 6ypq" style="background-color:#fffaf0;"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Phycocyanin|Phycocyanin]] | ||
| + | == References == | ||
| + | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Thermosynechococcus vestitus BP-1]] |
| + | [[Category: Falke S]] | ||
| + | [[Category: Feiler CG]] | ||
| + | [[Category: Sarrou I]] | ||
Current revision
Crystal structure of native Phycocyanin from T. elongatus in spacegroup R32 at 1.29 Angstroms
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