1auy

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Current revision (07:16, 23 October 2024) (edit) (undo)
 
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<StructureSection load='1auy' size='340' side='right'caption='[[1auy]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='1auy' size='340' side='right'caption='[[1auy]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1auy]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AUY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AUY FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1auy]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Turnip_yellow_mosaic_virus Turnip yellow mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1AUY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1AUY FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1auy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1auy OCA], [https://pdbe.org/1auy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1auy RCSB], [https://www.ebi.ac.uk/pdbsum/1auy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1auy ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1auy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1auy OCA], [https://pdbe.org/1auy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1auy RCSB], [https://www.ebi.ac.uk/pdbsum/1auy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1auy ProSAT]</span></td></tr>
</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CAPSD_TYMV CAPSD_TYMV] Self-assembles to form a T=3 icosahedral capsid composed of 180 copies of the capsid protein. The capsid encapsulates the single-stranded RNA genome (PubMed:15321716, PubMed:8784351). A pentameric unit may be lost during decapsidation (PubMed:15321716, PubMed:8784351).<ref>PMID:15321716</ref> <ref>PMID:8784351</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/au/1auy_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/au/1auy_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Canady, M A]]
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[[Category: Turnip yellow mosaic virus]]
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[[Category: Day, J]]
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[[Category: Canady MA]]
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[[Category: Larson, S B]]
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[[Category: Day J]]
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[[Category: McPherson, A]]
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[[Category: Larson SB]]
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[[Category: Capsid protein]]
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[[Category: McPherson A]]
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[[Category: Coat protein]]
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[[Category: Icosahedral virus]]
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[[Category: Jellyroll]]
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[[Category: Plant virus]]
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[[Category: Virus]]
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Current revision

TURNIP YELLOW MOSAIC VIRUS

PDB ID 1auy

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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