This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


5qui

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:28, 21 February 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==HumRadA1.2 soaked with napht-2,3-diol overnight at 5 mM==
==HumRadA1.2 soaked with napht-2,3-diol overnight at 5 mM==
-
<StructureSection load='5qui' size='340' side='right'caption='[[5qui]]' scene=''>
+
<StructureSection load='5qui' size='340' side='right'caption='[[5qui]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5QUI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5QUI FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5qui]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5QUI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5QUI FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5qui FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5qui OCA], [https://pdbe.org/5qui PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5qui RCSB], [https://www.ebi.ac.uk/pdbsum/5qui PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5qui ProSAT]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=D48:naphthalene-2,3-diol'>D48</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5qui FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5qui OCA], [https://pdbe.org/5qui PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5qui RCSB], [https://www.ebi.ac.uk/pdbsum/5qui PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5qui ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RADA_PYRFU RADA_PYRFU] Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules.
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
 +
[[Category: Pyrococcus furiosus]]
[[Category: Hyvonen M]]
[[Category: Hyvonen M]]
[[Category: Marsh M]]
[[Category: Marsh M]]

Current revision

HumRadA1.2 soaked with napht-2,3-diol overnight at 5 mM

PDB ID 5qui

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools