1dt1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:32, 30 October 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='1dt1' size='340' side='right'caption='[[1dt1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
<StructureSection load='1dt1' size='340' side='right'caption='[[1dt1]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1dt1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DT1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DT1 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1dt1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DT1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DT1 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dt1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dt1 OCA], [https://pdbe.org/1dt1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dt1 RCSB], [https://www.ebi.ac.uk/pdbsum/1dt1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dt1 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dt1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dt1 OCA], [https://pdbe.org/1dt1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dt1 RCSB], [https://www.ebi.ac.uk/pdbsum/1dt1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dt1 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/CY552_THET8 CY552_THET8]] This monoheme basic protein appears to function as an electron donor to cytochrome oxidase in T.thermophilus.
+
[https://www.uniprot.org/uniprot/CY552_THET8 CY552_THET8] This monoheme basic protein appears to function as an electron donor to cytochrome oxidase in T.thermophilus.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dt/1dt1_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dt/1dt1_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 30: Line 31:
==See Also==
==See Also==
-
*[[Nitrite reductase 3D structures|Nitrite reductase 3D structures]]
+
*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
== References ==
== References ==
<references/>
<references/>
Line 36: Line 37:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Thet8]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Ai, J]]
+
[[Category: Ai J]]
-
[[Category: Chen, Y]]
+
[[Category: Chen Y]]
-
[[Category: Fee, J A]]
+
[[Category: Fee JA]]
-
[[Category: Gomez-Moran, E]]
+
[[Category: Gomez-Moran E]]
-
[[Category: Hill, M J]]
+
[[Category: Hill MJ]]
-
[[Category: Loehr, T]]
+
[[Category: Loehr T]]
-
[[Category: McRee, D E]]
+
[[Category: McRee DE]]
-
[[Category: Sridhar, V]]
+
[[Category: Sridhar V]]
-
[[Category: Stura, E]]
+
[[Category: Stura E]]
-
[[Category: Thony-Meyer, L]]
+
[[Category: Thony-Meyer L]]
-
[[Category: Williams, P A]]
+
[[Category: Williams PA]]
-
[[Category: Cytochrome c552]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Thermus thermophilus]]
+

Current revision

THERMUS THERMOPHILUS CYTOCHROME C552 SYNTHESIZED BY ESCHERICHIA COLI

PDB ID 1dt1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools