This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


User:Grace Hall/Sandbox 1

From Proteopedia

< User:Grace Hall(Difference between revisions)
Jump to: navigation, search
Current revision (22:09, 21 April 2021) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
=Diacylglyceride Acyl Transferase, DGAT=
=Diacylglyceride Acyl Transferase, DGAT=
-
<StructureSection load='6vyi' size='340' side='right' caption='Caption for this structure' scene=''>
+
<StructureSection load='6VYI' size='350' frame='true' side='right' caption='DGAT 6VYI' scene=’’>
This is a default text for your page '''Grace Hall/Sandbox 1'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
This is a default text for your page '''Grace Hall/Sandbox 1'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
Line 10: Line 10:
[https://en.wikipedia.org/wiki/Membrane_protein Membrane Protein]
[https://en.wikipedia.org/wiki/Membrane_protein Membrane Protein]
== Disease ==
== Disease ==
 +
<scene name='87/877553/L105/1'>L105P</scene>
 +
 +
<scene name='87/877557/Hydrophobic_interface/3'>hydrophobic interactions</scene>
 +
 +
[https://en.wikipedia.org/wiki/Fatty_liver_disease fatty liver disease]
 +
 +
[https://en.wikipedia.org/wiki/Hypertriglyceridemia Hypertriglyceridemia]
 +
 +
[https://en.wikipedia.org/wiki/Exon exon]
== Relevance ==
== Relevance ==
Line 15: Line 24:
== Structural highlights ==
== Structural highlights ==
-
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
+
This is a sample scene created with SAT to <scene name='87/877553/His415_white/1'>His415</scene> by Group, and another to make <scene name='87/877553/His415_white/3'>Top View of Protein</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
</StructureSection>
</StructureSection>
== References ==
== References ==
 +
<ref name="Ransey">PMID:28504306</ref>
<references/>
<references/>

Current revision

Diacylglyceride Acyl Transferase, DGAT

DGAT 6VYI

Drag the structure with the mouse to rotate

References

[3]

  1. Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
  3. Ransey E, Paredes E, Dey SK, Das SR, Heroux A, Macbeth MR. Crystal structure of the Entamoeba histolytica RNA lariat debranching enzyme EhDbr1 reveals a catalytic Zn(2+) /Mn(2+) heterobinucleation. FEBS Lett. 2017 Jul;591(13):2003-2010. doi: 10.1002/1873-3468.12677. Epub 2017, Jun 14. PMID:28504306 doi:http://dx.doi.org/10.1002/1873-3468.12677

Student Contributors

  • Grace Hall
  • Karina Latsko
  • Megan Leaman

Proteopedia Page Contributors and Editors (what is this?)

Grace Hall

Personal tools