6adm

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:01, 30 October 2024) (edit) (undo)
 
Line 3: Line 3:
<SX load='6adm' size='340' side='right' viewer='molstar' caption='[[6adm]], [[Resolution|resolution]] 2.84&Aring;' scene=''>
<SX load='6adm' size='340' side='right' viewer='molstar' caption='[[6adm]], [[Resolution|resolution]] 2.84&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6adm]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Human Human] and [https://en.wikipedia.org/wiki/Seneca_valley_virus Seneca valley virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ADM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ADM FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6adm]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Senecavirus_A Senecavirus A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ADM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ADM FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.84&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ANTXR1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6adm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6adm OCA], [https://pdbe.org/6adm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6adm RCSB], [https://www.ebi.ac.uk/pdbsum/6adm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6adm ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6adm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6adm OCA], [https://pdbe.org/6adm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6adm RCSB], [https://www.ebi.ac.uk/pdbsum/6adm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6adm ProSAT]</span></td></tr>
</table>
</table>
-
== Disease ==
 
-
[[https://www.uniprot.org/uniprot/ANTR1_HUMAN ANTR1_HUMAN]] Defects in ANTXR1 are associated with susceptibility to hemangioma capillary infantile (HCI) [MIM:[https://omim.org/entry/602089 602089]]. HCI are benign, highly proliferative lesions involving aberrant localized growth of capillary endothelium. They are the most common tumor of infancy, occurring in up to 10% of all births. Hemangiomas tend to appear shortly after birth and show rapid neonatal growth for up to 12 months characterized by endothelial hypercellularity and increased numbers of mast cells. This phase is followed by slow involution at a rate of about 10% per year and replacement by fibrofatty stroma.<ref>PMID:18931684</ref>
 
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/ANTR1_HUMAN ANTR1_HUMAN]] Plays a role in cell attachment and migration. Interacts with extracellular matrix proteins and with the actin cytoskeleton. Mediates adhesion of cells to type 1 collagen and gelatin, reorganization of the actin cytoskeleton and promotes cell spreading. Plays a role in the angiogenic response of cultured umbilical vein endothelial cells.<ref>PMID:15777794</ref> <ref>PMID:16762926</ref>
+
[https://www.uniprot.org/uniprot/A0A1U9IRU2_9PICO A0A1U9IRU2_9PICO]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 23:
__TOC__
__TOC__
</SX>
</SX>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Seneca valley virus]]
+
[[Category: Senecavirus A]]
-
[[Category: Cao, L]]
+
[[Category: Cao L]]
-
[[Category: Lou, Z Y]]
+
[[Category: Lou ZY]]
-
[[Category: Virus]]
+

Current revision

Anthrax Toxin Receptor 1-bound full particles of Seneca Valley Virus in acidic conditions

6adm, resolution 2.84Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools