This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2hx5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:46, 25 January 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='2hx5' size='340' side='right'caption='[[2hx5]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='2hx5' size='340' side='right'caption='[[2hx5]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2hx5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Promm Promm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HX5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HX5 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2hx5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Prochlorococcus_marinus_str._MIT_9313 Prochlorococcus marinus str. MIT 9313]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HX5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HX5 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ETX:2-ETHOXYETHANOL'>ETX</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ETX:2-ETHOXYETHANOL'>ETX</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NP_895880.1 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=74547 PROMM])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hx5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hx5 OCA], [https://pdbe.org/2hx5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hx5 RCSB], [https://www.ebi.ac.uk/pdbsum/2hx5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hx5 ProSAT], [https://www.topsan.org/Proteins/JCSG/2hx5 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hx5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hx5 OCA], [https://pdbe.org/2hx5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hx5 RCSB], [https://www.ebi.ac.uk/pdbsum/2hx5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hx5 ProSAT], [https://www.topsan.org/Proteins/JCSG/2hx5 TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/DNCH_PROMM DNCH_PROMM]] Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis.[HAMAP-Rule:MF_02101]
+
[https://www.uniprot.org/uniprot/DNCH_PROMM DNCH_PROMM] Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis.[HAMAP-Rule:MF_02101]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 24: Line 22:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Promm]]
+
[[Category: Prochlorococcus marinus str. MIT 9313]]
-
[[Category: Structural genomic]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Jcsg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Thioesterase/thiol ester dehydrase-isomerase fold]]
+

Current revision

Crystal structure of a putative thioesterase (pmt_2055) from prochlorococcus marinus str. mit 9313 at 1.50 A resolution

PDB ID 2hx5

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools