This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


7m40

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "7m40" [edit=sysop:move=sysop])
Current revision (16:05, 18 October 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 7m40 is ON HOLD
+
==Discovery of small molecule antagonists of human Retinoblastoma Binding Protein 4 (RBBP4)==
 +
<StructureSection load='7m40' size='340' side='right'caption='[[7m40]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[7m40]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7M40 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7M40 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.88&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=YQJ:N~3~-{4-[3-(dimethylamino)pyrrolidin-1-yl]-6,7-dimethoxyquinazolin-2-yl}-N~1~,N~1~-dimethylpropane-1,3-diamine'>YQJ</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7m40 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7m40 OCA], [https://pdbe.org/7m40 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7m40 RCSB], [https://www.ebi.ac.uk/pdbsum/7m40 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7m40 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RBBP4_HUMAN RBBP4_HUMAN] Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the core histone deacetylase (HDAC) complex, which promotes histone deacetylation and consequent transcriptional repression; the nucleosome remodeling and histone deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylation and nucleosome remodeling; the PRC2/EED-EZH2 complex, which promotes repression of homeotic genes during development; and the NURF (nucleosome remodeling factor) complex.<ref>PMID:10866654</ref>
-
Authors: Perveen, S., Dong, A., Tempel, W., Zepeda-Velazquez, C., Abbey, M., McLeod, D., Marcellus, R., Mohammed, M., Ensan, D., Panagopoulos, D., Trush, V., Gibson, E., Brown, P.J., Arrowsmith, C.H., Schapira, M., Al-awar, R., Vedadi, M., Structural Genomics Consortium (SGC)
+
==See Also==
-
 
+
*[[Retinoblastoma-binding protein 3D structures|Retinoblastoma-binding protein 3D structures]]
-
Description: Discovery of small molecule antagonists of human Retinoblastoma Binding Protein 4 (RBBP4)
+
== References ==
-
[[Category: Unreleased Structures]]
+
<references/>
-
[[Category: Abbey, M]]
+
__TOC__
-
[[Category: Panagopoulos, D]]
+
</StructureSection>
-
[[Category: Arrowsmith, C.H]]
+
[[Category: Homo sapiens]]
-
[[Category: Trush, V]]
+
[[Category: Large Structures]]
-
[[Category: Ensan, D]]
+
[[Category: Abbey M]]
-
[[Category: Dong, A]]
+
[[Category: Al-awar R]]
-
[[Category: Vedadi, M]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Gibson, E]]
+
[[Category: Brown PJ]]
-
[[Category: Brown, P.J]]
+
[[Category: Dong A]]
-
[[Category: Mohammed, M]]
+
[[Category: Ensan D]]
-
[[Category: Al-Awar, R]]
+
[[Category: Gibson E]]
-
[[Category: Perveen, S]]
+
[[Category: Marcellus R]]
-
[[Category: Marcellus, R]]
+
[[Category: McLeod D]]
-
[[Category: Schapira, M]]
+
[[Category: Mohammed M]]
-
[[Category: Structural Genomics Consortium (Sgc)]]
+
[[Category: Panagopoulos D]]
-
[[Category: Zepeda-Velazquez, C]]
+
[[Category: Perveen S]]
-
[[Category: Tempel, W]]
+
[[Category: Schapira M]]
-
[[Category: Mcleod, D]]
+
[[Category: Tempel W]]
 +
[[Category: Trush V]]
 +
[[Category: Vedadi M]]
 +
[[Category: Zepeda-Velazquez C]]

Current revision

Discovery of small molecule antagonists of human Retinoblastoma Binding Protein 4 (RBBP4)

PDB ID 7m40

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools