6zh7

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Current revision (16:06, 13 December 2023) (edit) (undo)
 
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<StructureSection load='6zh7' size='340' side='right'caption='[[6zh7]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
<StructureSection load='6zh7' size='340' side='right'caption='[[6zh7]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6zh7]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ZH7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ZH7 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6zh7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlorella_variabilis Chlorella variabilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6ZH7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6ZH7 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=STE:STEARIC+ACID'>STE</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Lyase Lyase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.106 4.1.1.106] </span></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=STE:STEARIC+ACID'>STE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6zh7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6zh7 OCA], [https://pdbe.org/6zh7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6zh7 RCSB], [https://www.ebi.ac.uk/pdbsum/6zh7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6zh7 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6zh7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6zh7 OCA], [https://pdbe.org/6zh7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6zh7 RCSB], [https://www.ebi.ac.uk/pdbsum/6zh7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6zh7 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/FAP_CHLVA FAP_CHLVA]] Catalyzes the decarboxylation of free fatty acids to n-alkanes or n-alkenes in response to blue light (PubMed:28860382, PubMed:30106504, PubMed:30673222). Substrate preference is toward fatty acids with C16 or C17 chains (PubMed:28860382, PubMed:30106504, PubMed:30673222). Saturated fatty acids are converted to alkanes, not alkenes (PubMed:28860382). The decarboxylation is initiated through electron abstraction from the fatty acid by the photo-excited FAD (PubMed:28860382).<ref>PMID:28860382</ref> <ref>PMID:30106504</ref> <ref>PMID:30673222</ref>
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[https://www.uniprot.org/uniprot/FAP_CHLVA FAP_CHLVA] Catalyzes the decarboxylation of free fatty acids to n-alkanes or n-alkenes in response to blue light (PubMed:28860382, PubMed:30106504, PubMed:30673222). Substrate preference is toward fatty acids with C16 or C17 chains (PubMed:28860382, PubMed:30106504, PubMed:30673222). Saturated fatty acids are converted to alkanes, not alkenes (PubMed:28860382). The decarboxylation is initiated through electron abstraction from the fatty acid by the photo-excited FAD (PubMed:28860382).<ref>PMID:28860382</ref> <ref>PMID:30106504</ref> <ref>PMID:30673222</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Chlorella variabilis]]
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Lyase]]
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[[Category: Barends TRM]]
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[[Category: Barends, T R.M]]
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[[Category: Colletier JP]]
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[[Category: Colletier, J P]]
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[[Category: Coquelle N]]
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[[Category: Coquelle, N]]
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[[Category: Hadjidemetriou K]]
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[[Category: Hadjidemetriou, K]]
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[[Category: Schlichting I]]
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[[Category: Schlichting, I]]
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[[Category: Weik M]]
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[[Category: Weik, M]]
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[[Category: Oxidoreductase]]
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[[Category: Photoenzyme]]
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[[Category: Radiation damage free]]
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[[Category: Xfel]]
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Current revision

Crystal structure of fatty acid photodecarboxylase in the dark state determined by serial femtosecond crystallography at room temperature

PDB ID 6zh7

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