1yd7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (00:41, 21 November 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<StructureSection load='1yd7' size='340' side='right'caption='[[1yd7]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
<StructureSection load='1yd7' size='340' side='right'caption='[[1yd7]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1yd7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43587 Atcc 43587]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YD7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YD7 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1yd7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YD7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YD7 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yd7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yd7 OCA], [https://pdbe.org/1yd7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yd7 RCSB], [https://www.ebi.ac.uk/pdbsum/1yd7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yd7 ProSAT], [https://www.topsan.org/Proteins/SECSG/1yd7 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yd7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yd7 OCA], [https://pdbe.org/1yd7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yd7 RCSB], [https://www.ebi.ac.uk/pdbsum/1yd7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yd7 ProSAT], [https://www.topsan.org/Proteins/SECSG/1yd7 TOPSAN]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q8U046_PYRFU Q8U046_PYRFU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1yd7_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yd/1yd7_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 20: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 43587]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Adams, M W.W]]
 
-
[[Category: Chang, J]]
 
-
[[Category: Chang, S H]]
 
-
[[Category: Chen, L]]
 
-
[[Category: Florence, Q]]
 
-
[[Category: Habel, J]]
 
-
[[Category: Horanyi, P]]
 
-
[[Category: Jenney, F E]]
 
-
[[Category: Lee, D]]
 
-
[[Category: Lin, D]]
 
-
[[Category: Liu, Z J]]
 
-
[[Category: Nguyen, D]]
 
-
[[Category: Praissman, J]]
 
-
[[Category: Rose, J P]]
 
-
[[Category: Structural genomic]]
 
-
[[Category: Tempel, W]]
 
-
[[Category: Wang, B C]]
 
-
[[Category: Xu, H]]
 
-
[[Category: Zhang, H]]
 
-
[[Category: Zhao, M]]
 
-
[[Category: Zhou, W]]
 
-
[[Category: Conserved hypothetical protein]]
 
-
[[Category: Hyperthermophile]]
 
-
[[Category: Oxidoreductase]]
 
-
[[Category: PSI, Protein structure initiative]]
 
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
-
[[Category: Secsg]]
+
[[Category: Adams MWW]]
 +
[[Category: Chang J]]
 +
[[Category: Chang S-H]]
 +
[[Category: Chen L]]
 +
[[Category: Florence Q]]
 +
[[Category: Habel J]]
 +
[[Category: Horanyi P]]
 +
[[Category: Jenney Jr FE]]
 +
[[Category: Lee D]]
 +
[[Category: Lin D]]
 +
[[Category: Liu Z-J]]
 +
[[Category: Nguyen D]]
 +
[[Category: Praissman J]]
 +
[[Category: Rose JP]]
 +
[[Category: Tempel W]]
 +
[[Category: Wang B-C]]
 +
[[Category: Xu H]]
 +
[[Category: Zhang H]]
 +
[[Category: Zhao M]]
 +
[[Category: Zhou W]]

Current revision

Conserved hypothetical protein Pfu-1647980-001 from Pyrococcus furiosus

PDB ID 1yd7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools