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1lu1
From Proteopedia
(Difference between revisions)
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<StructureSection load='1lu1' size='340' side='right'caption='[[1lu1]], [[Resolution|resolution]] 2.60Å' scene=''> | <StructureSection load='1lu1' size='340' side='right'caption='[[1lu1]], [[Resolution|resolution]] 2.60Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1lu1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1lu1]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vigna_unguiculata_subsp._cylindrica Vigna unguiculata subsp. cylindrica]. The December 2012 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''ABO Blood Type Glycosyltransferases'' by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2012_12 10.2210/rcsb_pdb/mom_2012_12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LU1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LU1 FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand= | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> |
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A2G:N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE'>A2G</scene>, <scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NGA:N-ACETYL-D-GALACTOSAMINE'>NGA</scene>, <scene name='pdbligand=PRD_900083:Forssman+antigen+fragment'>PRD_900083</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lu1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lu1 OCA], [https://pdbe.org/1lu1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lu1 RCSB], [https://www.ebi.ac.uk/pdbsum/1lu1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lu1 ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lu1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lu1 OCA], [https://pdbe.org/1lu1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lu1 RCSB], [https://www.ebi.ac.uk/pdbsum/1lu1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lu1 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/LEC1_VIGUC LEC1_VIGUC] Metalloglycoprotein, containing Ca, Mg, Mn, and Zn and the carbohydrates galactose, glucosamine, mannose, and fucose. It agglutinates erythrocytes of blood group A1. Has a high preference for GalNAc over Gal. | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: ABO Blood Type Glycosyltransferases]] | [[Category: ABO Blood Type Glycosyltransferases]] | ||
| - | [[Category: Dolichos biflorus]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
[[Category: RCSB PDB Molecule of the Month]] | [[Category: RCSB PDB Molecule of the Month]] | ||
| - | [[Category: Bouckaert | + | [[Category: Vigna unguiculata subsp. cylindrica]] |
| - | [[Category: Etzler | + | [[Category: Bouckaert J]] |
| - | [[Category: Fernandez | + | [[Category: Etzler ME]] |
| - | [[Category: Hamelryck | + | [[Category: Fernandez E]] |
| - | [[Category: Imberty | + | [[Category: Hamelryck TW]] |
| - | [[Category: Loris | + | [[Category: Imberty A]] |
| - | [[Category: Strecker | + | [[Category: Loris R]] |
| - | [[Category: Wyns | + | [[Category: Strecker G]] |
| - | + | [[Category: Wyns L]] | |
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| - | + | ||
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Current revision
THE STRUCTURE OF THE DOLICHOS BIFLORUS SEED LECTIN IN COMPLEX WITH THE FORSSMAN DISACCHARIDE
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