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1yyd
From Proteopedia
(Difference between revisions)
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<StructureSection load='1yyd' size='340' side='right'caption='[[1yyd]], [[Resolution|resolution]] 1.45Å' scene=''> | <StructureSection load='1yyd' size='340' side='right'caption='[[1yyd]], [[Resolution|resolution]] 1.45Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1yyd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[1yyd]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Phanerodontia_chrysosporium Phanerodontia chrysosporium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YYD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YYD FirstGlance]. <br> |
| - | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.45Å</td></tr> |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | + | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yyd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yyd OCA], [https://pdbe.org/1yyd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yyd RCSB], [https://www.ebi.ac.uk/pdbsum/1yyd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yyd ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yyd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yyd OCA], [https://pdbe.org/1yyd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yyd RCSB], [https://www.ebi.ac.uk/pdbsum/1yyd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yyd ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| - | + | [https://www.uniprot.org/uniprot/PEM1_PHACH PEM1_PHACH] Catalyzes the oxidation of Mn(2+) to Mn(3+). The latter, acting as a diffusible redox mediator, is capable of oxidizing a variety of lignin compounds. | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: | + | [[Category: Phanerodontia chrysosporium]] |
| - | + | [[Category: Gold MH]] | |
| - | [[Category: Gold | + | [[Category: Poulos TL]] |
| - | [[Category: Poulos | + | [[Category: Sundaramoorthy M]] |
| - | [[Category: Sundaramoorthy | + | [[Category: Youngs HL]] |
| - | [[Category: Youngs | + | |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
High Resolution Crystal Structure of Manganese Peroxidase
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