This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6xhk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:52, 18 October 2023) (edit) (undo)
 
Line 3: Line 3:
<StructureSection load='6xhk' size='340' side='right'caption='[[6xhk]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
<StructureSection load='6xhk' size='340' side='right'caption='[[6xhk]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6xhk]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XHK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XHK FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6xhk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus_subsp._aureus_NCTC_8325 Staphylococcus aureus subsp. aureus NCTC 8325]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6XHK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6XHK FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=NDP:NADPH+DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NDP</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/Oxidoreductase Oxidoreductase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.405 1.1.1.405] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xhk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xhk OCA], [https://pdbe.org/6xhk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xhk RCSB], [https://www.ebi.ac.uk/pdbsum/6xhk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xhk ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6xhk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6xhk OCA], [https://pdbe.org/6xhk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6xhk RCSB], [https://www.ebi.ac.uk/pdbsum/6xhk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6xhk ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[https://www.uniprot.org/uniprot/TARJ1_STAA8 TARJ1_STAA8]] Catalyzes the NADPH dependent reduction of D-ribulose 5-phosphate to D-ribitol 5-phosphate.[HAMAP-Rule:MF_02069]<ref>PMID:15362865</ref>
+
[https://www.uniprot.org/uniprot/TARJ1_STAA8 TARJ1_STAA8] Catalyzes the NADPH dependent reduction of D-ribulose 5-phosphate to D-ribitol 5-phosphate.[HAMAP-Rule:MF_02069]<ref>PMID:15362865</ref>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 25: Line 24:
</StructureSection>
</StructureSection>
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Oxidoreductase]]
+
[[Category: Staphylococcus aureus subsp. aureus NCTC 8325]]
-
[[Category: Li, F K.K]]
+
[[Category: Li FKK]]
-
[[Category: Strynadka, N C.J]]
+
[[Category: Strynadka NCJ]]
-
[[Category: Alcohol dehydrogenase]]
+

Current revision

Crystal structure of S. aureus TarJ in complex with NADPH

PDB ID 6xhk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6xhk"
Personal tools