2ddb
From Proteopedia
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<StructureSection load='2ddb' size='340' side='right'caption='[[2ddb]], [[Resolution|resolution]] 1.90Å' scene=''> | <StructureSection load='2ddb' size='340' side='right'caption='[[2ddb]], [[Resolution|resolution]] 1.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2ddb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/ | + | <table><tr><td colspan='2'>[[2ddb]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudechis_porphyriacus Pseudechis porphyriacus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DDB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DDB FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | |
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ddb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ddb OCA], [https://pdbe.org/2ddb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ddb RCSB], [https://www.ebi.ac.uk/pdbsum/2ddb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ddb ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ddb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ddb OCA], [https://pdbe.org/2ddb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ddb RCSB], [https://www.ebi.ac.uk/pdbsum/2ddb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ddb ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
- | + | [https://www.uniprot.org/uniprot/CRVP_PSEPO CRVP_PSEPO] Blocks olfactory (CNGA2) and retinal (CNGA1) CNG channel currents. Is really less potent that Pseudechetoxin. Does not affect neither depolarization- nor caffeine-induced contraction of smooth muscle.<ref>PMID:12234174</ref> | |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dd/2ddb_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dd/2ddb_consurf.spt"</scriptWhenChecked> | ||
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: | + | [[Category: Pseudechis porphyriacus]] |
- | [[Category: Fujimoto | + | [[Category: Fujimoto Z]] |
- | [[Category: Mizuno | + | [[Category: Mizuno H]] |
- | [[Category: Morita | + | [[Category: Morita T]] |
- | [[Category: Suzuki | + | [[Category: Suzuki N]] |
- | [[Category: Yamazaki | + | [[Category: Yamazaki Y]] |
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Current revision
Crystal structure of pseudecin from Pseudechis porphyriacus
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